Pseudooceanicola algae: PSAL_016440
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Entry
PSAL_016440 CDS
T06943
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
palw
Pseudooceanicola algae
Brite
KEGG Orthology (KO) [BR:
palw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
palw02000
]
PSAL_016440
Transporters [BR:
palw02000
]
Other transporters
Pores ion channels [TC:
1
]
PSAL_016440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
QPM90406
UniProt:
A0A418SHP5
LinkDB
All DBs
Position
1739676..1743830
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AA seq
1384 aa
AA seq
DB search
MLRKYLITLAALTALLLPAPVLLAQDADEDDGANFLSRTLQKVLSSAGREVRITGFEGAL
STQATLGKMTIADDDGIWLELDNAVLDWRRLALLRGRLQINELTAESLTIYRLPPTVEDT
SAPAPESSGFSLPDLPVSINLDQMRLDKVDLREPVFGQAAVLSLTGKAALANGGLDTDIQ
IDRLDRDGEISVTAAYAPDNEQITVDLTVQEPEGGILAHLMQLPGLPSVDLTVNGEGPLD
NFAADLRLATDGEDRLTGKAAITGRDDGGREFNLNLGGDLTALAAPDYRDFMGTDIGLVA
TGSQDSDGAINLDLFRVRSAALNMEGKLALDADKQPSFFDLTGQIASPQGADRVDLPFGE
GISLAGADLKLDFDRSQSDAITGRIEARAPAAQGFAADTLALDISGALPKDGAGQVGIAF
DASGLSTDDPALAQAVGDAVTGSATIGFGEGPVEIRDLVFNNDVVALTGSASFETEEKKA
NVSVAAQADVSDLSAFSALAGLEGLAGQTAVDVTLDMTLPSGEMRLTATGSGDNLRTGIE
QADALLATPVALDVDVERNETGLTVHKLDIGNEALQATAEGRLASNDGEITYALTLADAG
VMTGTQSGPVTFGGAVTQTEEAMHLTGSGGGTDIAVGIEAVDNLLAGKLDLDFALNLPNE
GAPDLENALIETGELRVQADGSLDPAAMALDFSARLANSGVFTGGNAGPLSLNGQVRTEA
GGVIHAQLSGGGDQLGIGIEAVDNLLQGRLGLEADATVDGTLITLHRARVESPGLTLNAS
GTMDDGTLDFSASLGLPNSAAPLGEQAGPVDLTLKVTGSEGAYRVVADGKGQDMGIGNDL
VDSLFADDSTLRADVSRAAGGGIRIDEASFTSRAITATASGVVDEEGPKMDFDARLDNMN
RLSPQMNGPLTVKGAVRPDTSGAISVNVTADGPAGAQARVAGLVAKPDGSVDVTVNGSVP
LGLANGFISPRSVSGTAAFDLALNGQPGLDALSGQIRLSDGRVVAPALGQVINNISGTIG
LGGSRANVQMTVAPQDGGRLTIAGPVDLNAPYNANVDVTFASFIVNQGSFATTELNGTVA
VRGALTGGGSVTGRIGLTNTEIRLADTGLGGPEAIPDIRHLSEPRGSYLTRDRAGLVLTE
TSQAGGGSGTAAPPLNLDLQIVADNAIFIRGRGLDAELRGGLTIQGTTADIRPVGQFDLV
RGRLDIVAKRIDLTEGYVQLAGSFEPIIHFVAESESGDYVITISIDGSVIEPEVEFTSDP
DLPEDEVLSQLFFGSGLNSLSPLQAAELASAVATLTGSGNGGLFEKLRAGTGLDELDVST
NDDGQTSLTLGKYFANGVYSETEVTGDGETSLTLNFDVSDDVTAKAEATSDGDTSLGIFF
ERDY
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtaaatacctgatcacccttgcagccctcacggcgctgctgctgcctgccccg
gtccttctggcgcaggatgcagacgaagacgacggcgcgaatttcctgtcgcgcaccctg
cagaaggtgctgtccagcgccggtcgcgaagtgcgcatcaccggcttcgaaggcgcgctg
tcgacccaggcaaccctcggcaagatgaccatcgccgatgacgacggcatctggctcgaa
ctggacaacgccgtgctggactggcgccgccttgcgctgctgcgcggccgtcttcagatc
aacgaactgacggccgaaagcctgaccatctaccgcctgccacccacggtcgaggatacc
tcggccccggcgccggaatcttcgggcttttcgctgccggacctgccggtatcgatcaac
ctcgaccagatgcgtctggacaaggttgatctgcgcgaaccggtcttcgggcaggccgct
gtcctgtcgctgaccggcaaggccgccctggccaatggcggactggataccgacatccag
atcgaccggctggaccgcgacggcgagatttccgtcaccgccgcctatgcgcctgacaac
gaacagatcaccgtcgacctgacggtgcaggaacccgagggcgggattctggcgcatctg
atgcagcttccgggtctcccttcggtcgacctgaccgtgaatggcgagggcccgctggac
aatttcgccgccgatctgcgccttgccacggatggtgaggaccgcctgaccggcaaggcc
gcgattaccgggcgcgacgacgggggccgtgaattcaatctcaacctcgggggcgacctg
accgcgctggccgcaccggattaccgcgacttcatgggcaccgatatcggcctagtcgcc
accgggagtcaggatagtgacggggcgatcaatcttgatctgttccgcgtcagatccgcc
gcgctgaacatggaaggcaagctggcgctggacgccgacaagcagccgtcgttctttgac
ctgaccggccagatcgcctcgcctcagggtgcggaccgggtcgatctgcccttcggtgaa
ggtatttcgctggccggggccgacctgaaactggacttcgaccgcagccagtcggatgcg
attaccggtcggatcgaggcgcgtgcgcccgccgctcagggctttgctgccgacacgctg
gcgctggatatctcgggcgccctgcccaaggacggcgcaggccaggtgggcatcgcattc
gatgccagcggcctttcgaccgatgatcccgccctggcccaggcggtcggggacgcggtg
acaggctcggccacgatcggcttcggcgaaggcccggtcgagatccgcgaccttgtgttc
aacaacgatgtcgtggccctgacaggctctgccagtttcgaaaccgaggaaaagaaggcc
aatgtctcggtcgcggctcaggccgatgtgtccgatctgtcggccttttccgcccttgcc
ggactggaaggcctcgccggtcagacggccgtggatgtgacgctcgacatgaccctgccc
tcgggcgagatgcgtctgacggccaccgggtcgggcgacaacctgcgtaccgggatcgaa
caggccgatgccctgctggcaacacctgtcgcactggacgtggatgtcgaacgcaacgag
accgggctgacggtccacaagctcgacatcggcaacgaggcccttcaggccaccgccgag
ggtcgcctggccagcaatgacggcgagatcacctatgccctgaccctggccgatgccggg
gtgatgacgggcacacaatcgggtcccgtgacctttggcggcgccgtgacccagaccgaa
gaggccatgcatctgaccggttcgggtggtggcaccgacatcgccgtcgggatcgaagcg
gtcgacaaccttctggccggcaagcttgacctggacttcgcgctgaacctgcccaacgag
ggtgcaccggaccttgaaaacgccctgatcgaaaccggagagctgcgggttcaggccgac
ggcagccttgatccggcggccatggcgctggacttttcggcgcgccttgccaattccggt
gtcttcacaggcggcaatgccggacctctcagtctgaatggccaggtccgcaccgaggca
ggcggcgtgatccatgcgcagctttcgggtgggggtgaccagcttggcatcgggatcgaa
gcggtggacaacctgttgcagggccgtcttgggctggaggccgacgcaacggtcgacggc
accctgatcaccctgcaccgcgcccgtgtggaatcgccggggctgacgctgaatgcctcc
gggacgatggatgacggcacgctggatttcagtgccagccttggcctgcccaattccgcc
gccccgcttggcgaacaggccgggccggtcgatctgacgctgaaggtcaccggatccgag
ggcgcctatcgcgtcgtcgccgatggcaaggggcaggacatggggatcggcaacgatctg
gtcgactcgcttttcgccgacgacagcaccctgcgggccgatgtcagcagggccgccggt
ggcggtatccgcatcgacgaagccagctttacctcgcgggcgatcaccgcaacggcctcg
ggtgtcgtggacgaggaagggccgaagatggacttcgacgcccggctcgacaacatgaac
cgcctgtcgccgcagatgaacggcccgctgaccgtcaagggcgcggtccgccccgacacg
agcggggcgatctcggtcaatgtgacggcggacggccccgccggggcgcaggccagggtt
gccggtctggtcgccaagcccgatggctcggtcgatgtcacggtcaacggctcggtgccg
ctggggctggccaacggcttcatctcgccgcggtccgtttccggcacggcagccttcgac
ctggcgctgaacggacagcccggccttgacgcgctgagcggtcagatcaggctgagcgat
ggccgcgtggttgcccccgctctgggccaggtgatcaacaacatctctggcacaatcggt
ctgggtggcagccgggccaacgtgcagatgacagtcgcgccacaggacggcgggcggctg
accatcgccggaccggtcgatctgaatgcgccctataacgccaatgtcgacgtgaccttc
gccagcttcatcgtcaaccagggcagctttgccaccaccgaactgaacggcaccgtcgcg
gtgcgcggtgcgctgaccgggggcgggtcggtgacgggtcgcatcggcctgacgaatacc
gagatccgtctggccgacaccggcctgggcgggccggaggccatacccgacatccgccat
ctcagcgaacccaggggcagctacctgacgcgggatcgcgccgggctggtgctgaccgag
acgtcgcaggccggcggcgggtccggcacagccgcgccaccgctgaacctcgatttgcag
atcgtggccgataacgcgatcttcatccggggccgtggccttgatgcggaactgcgtggc
ggtcttacgatccagggcaccactgccgatatccgtccggtcggccagttcgacctggtg
cgcggacggctcgatatcgtggcaaagcggatcgacctgaccgaaggctatgtccagctt
gccggcagcttcgagccgatcatccacttcgtcgcggaatccgaaagcggcgactacgtg
ataaccatctcgatcgacggcagcgtgatcgaacccgaggtcgagttcacctcggatccg
gatctgcccgaggacgaggtgctgtcgcagctgttcttcggaagcgggctgaattcgcta
agcccgcttcaggccgccgaactggccagcgccgtggccaccctgaccggatccggcaat
ggcgggctatttgaaaaactgcgcgccgggaccgggctggatgaactggatgtctcgacc
aacgacgacggccagaccagcctgaccctgggcaagtatttcgccaatggcgtctattca
gaaaccgaggtcacgggcgatggcgaaaccagcctgacgctcaacttcgatgtctcggac
gatgtgaccgccaaggccgaggcaacctcggacggcgatacatctctcgggatcttcttc
gaaagggattactag
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