Pseudooceanicola algae: PSAL_020110
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Entry
PSAL_020110 CDS
T06943
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
palw
Pseudooceanicola algae
Pathway
palw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
palw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PSAL_020110 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palw03021
]
PSAL_020110 (rpoA)
03400 DNA repair and recombination proteins [BR:
palw03400
]
PSAL_020110 (rpoA)
Enzymes [BR:
palw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PSAL_020110 (rpoA)
Transcription machinery [BR:
palw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PSAL_020110 (rpoA)
DNA repair and recombination proteins [BR:
palw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PSAL_020110 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
QPM90771
UniProt:
A0A418SFV3
LinkDB
All DBs
Position
complement(2161085..2162101)
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLDVKPGNDPARQATVVAEPLERGFGLTLGNALRRILMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIVLNLKGVSLKMEVEGPKRLSITAKGPGAVTAADISE
STGIEVLNKDHVICHLDEGADLYMELTVNTGKGYVSADKNKPEDAPIGLIPIDAIYSPIK
KVSYDVQPTREGQVLDYDKLTMKVDTDGSITPDDAVAYAARILQDQLSIFVNFEEPESAS
RQDDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDHF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaactgggcagaacttatcaaaccgacgcagcttgacgtcaaaccgggc
aatgacccggcgcgccaggctaccgtcgtcgcagagccgctcgagcggggcttcggcctg
acgctcggcaacgcgctgcgccgcattctcatgtcgtcccttcagggcgccgccatcacc
agcgtccagatcgacaacgtcctgcacgagttctcgagcgtggccggtgtgcgtgaggat
gtcaccgacatcgtgctgaacctcaagggcgtctccctgaagatggaagtcgaagggccc
aaacgcctgtcgatcaccgccaagggtccgggcgcggtcaccgctgccgatatctcggaa
agcaccggtatcgaggtcctgaacaaggatcacgtgatctgccacctcgacgagggcgcg
gatctgtacatggaactgacggtcaacaccggcaagggctatgtctcggctgacaagaac
aagcccgaagatgcccccatcggcctgatcccgatcgacgcgatctattcgccgatcaag
aaggtttcctacgacgttcagcccacccgcgagggccaggtgctggattacgacaagctg
acgatgaaggtcgacaccgacggctccatcaccccggacgatgccgtggcctatgccgcg
cgcattctgcaggaccagctttcgatcttcgtgaacttcgaagagccggaaagtgcctcg
cggcaggatgatgacgacggtctggaattcaacccgctcctcctcaagaaggtggacgag
ctggaattgtccgtccgttcggcaaactgcctgaagaacgacaacatcgtctatatcggc
gacctgatccagaagaccgaagccgagatgctgcgcaccccgaacttcggccggaaatcc
ctgaacgagatcaaggaagtgctttcgggcatgggcctgcacctcggcatggatgtcgaa
gactggccgccagacaacatcgaagatctggcgaagaagttcgaagaccacttctga
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