Pseudooceanicola algae: PSAL_021760
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Entry
PSAL_021760 CDS
T06943
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
palw
Pseudooceanicola algae
Brite
KEGG Orthology (KO) [BR:
palw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palw03021
]
PSAL_021760 (rapA)
Transcription machinery [BR:
palw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PSAL_021760 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ResIII
DEAD
Helicase_C
AAA_22
FapA
Motif
Other DBs
NCBI-ProteinID:
QPM90933
UniProt:
A0A418SKW5
LinkDB
All DBs
Position
complement(2326794..2329586)
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AA seq
930 aa
AA seq
DB search
MNSFHLAQSGFHALERLVAAESWEMGGALGVAADPYPHQIANLRRILADTEIRHLLADEV
GMGKTVQALMILNILRRRDPSLRVAIVAPERICYQWQVELSARGHISAPILTDADEEQEH
PDGEGYVHLIKADMVRRQPARPSPEGYDMLIVDEIHAMNLEDAAFLSSLCRERQRRDAPR
FRHVLLLTATPRLGNRDWARAVIGAIEPERSEIANLLGREPLEFLSEDAAAAQAHVSDGT
LSAAAYRTAFAADRRILRQTRSQWPGMAPTRKVHTVRTAPSDAEVPKIKLQNAACRDGRD
NPIGSAPWLQCRQMFRAGSSLREMLRHRTFSAHQDLRDEVETTLSRNPGNALFDDLCDVL
LGYWHKDPERRIIIVAGDTPTVDMLERRLSEMFPHLSEGGIATMRGRYNTDLVHVVGAVQ
SEATVLIMEEFVEAGLNLHNFAEDMIFYNLPWQASRIDQLIGRLDRLRSGGLIAYMKDRT
VGRIGIWRMVVAGSADERVLEALDLMEVFEQPLPYLDEALSQRLDRIITDAAAGRDSFRQ
AASELKSELSFGLNQSGEDFGPAQPDTADDISEIVGNIRAAEHAGNDWLRLLHFSGALKG
GFPKSNDGERVATLSLPPLLEDCPYKLGAMTTRESEVFRWRRDRLGKPPKKDVVLPKEQL
GKRARFFSTGDEIHDDLVCQAYATLKVMTVSPTTVGVHLSDEGLASDLVGKTLILVRSSW
RPSILMDKQIRTRDDDVPAVRVGRLSDRRWMSTLFPDVIRTRCLVVSADGVVEVGADKIT
RALLGEGCKPTTNRQIQKMIAPVPEFQRLVNALAREMTQEERIRLGNSREEAMSAFSDRR
QTLTSETETYVRWKQLSIEQLRSRNIQDQQQIQMIEGQIAAEQRRMQARISGMTDRLRTL
EDTLANLANNSMSDTFVILARVLPSAHLVN
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgaatagctttcatcttgcccagtcgggctttcacgccctagaacgcctcgtcgcagct
gagtcttgggagatgggtggcgccctcggcgtcgcggccgacccttacccacatcagatc
gccaacctacgccgcatccttgcggacacggaaatccgtcaccttctcgccgatgaggtc
ggcatgggtaagacggtgcaggctttgatgatccttaatatcttgcgcaggcgggacccg
tctttaagggtggcaatcgtcgcaccggaacgcatctgctaccagtggcaggttgagctt
tcggcgcgcggccacatatcagcccccatcctgactgacgcagatgaagagcaggagcat
cccgatggcgaaggctatgtccacctgatcaaagcagacatggtccgcaggcaaccggca
cgtccttctccggagggctatgacatgctgatcgtggacgagatccacgccatgaacctc
gaagacgcggcattcctttccagtctgtgccgggagcgtcagcgtcgcgacgcgccacgg
ttcagacatgtcctgctgctgacggcaacgccgcgtctgggcaatcgcgattgggcccgc
gctgtcatcggtgcgatcgaaccggaacgctcggaaatcgccaacctcctcggccgcgag
cccttggaattcctgtcggaagacgccgctgcggcgcaggcgcacgtttccgacggcaca
ctctccgccgcggcctacaggaccgctttcgcggcggatcgccgaatccttcgtcagacg
cgaagccaatggccagggatggcgcctacgcgaaaggttcacactgtccgtaccgcgccg
tccgatgcagaggtgccgaagataaaactgcaaaatgcagcctgccgggacggtcgggac
aatccgatagggtcggccccttggctacaatgccgtcagatgttccgtgctggatccagc
ctacgcgaaatgctgcgccaccgaaccttctcggcccaccaggacttgcgggacgaggtg
gagaccaccctgtcgcgcaatcccggcaacgcgttgttcgacgacctgtgcgacgtgctg
ctcggctattggcacaaagatccagagcggcgtatcatcatcgtcgcgggcgacacgccc
accgtcgacatgctggaacggcgtctgtccgaaatgttcccgcacctctctgaaggtggc
atcgcaaccatgcgtggtcgctacaacactgatctggtgcatgtagtcggtgccgtccaa
agtgaggcgactgtcctgatcatggaggaatttgtcgaagcaggtctcaacctgcataac
ttcgccgaggacatgatcttctacaacctgccatggcaagcctcgcgtatcgatcagctc
ataggtcgccttgaccgcctccgctccggcgggctgattgcctacatgaaagatcggacc
gtgggcaggattggtatatggcgaatggtcgttgccggttctgcagatgagagggtgctt
gaagcacttgacctgatggaggtcttcgaacagcccttgccttacctcgacgaagccctg
tcccagcgtctcgacaggatcatcaccgatgcagcggctggccgcgacagcttcaggcag
gccgcctccgaactgaaaagcgagctgtccttcggcctgaaccagtctggagaggatttt
ggcccggcccagccggataccgcggacgacatcagcgagatcgttggcaatattcgtgcc
gcggagcatgctggaaatgattggttgcgcctattgcacttcagtggagccttgaaaggc
ggatttccaaaatccaacgacggcgaacgcgtcgcaaccctttctttgccgccactgctg
gaagattgcccctacaaactcggcgcgatgacaacgcgcgaatccgaggtttttcgctgg
cgccgggatcgacttggtaagccacccaaaaaagatgtcgtcttgccgaaggaacaactc
gggaaacgagcccgtttcttttcgactggagacgaaatacatgatgacttggtctgtcag
gcttatgccacgttgaaagtaatgacggtttcccctactacggtcggcgtccatttgtcg
gatgaaggcctggcttcagatctggtcgggaaaacgctgatattggttcgcagctcttgg
cggccatcgatactcatggacaagcaaatcaggacgcgcgacgacgatgttccggccgtg
cgcgtcggacgcctttctgaccgccgatggatgtccaccctgttccccgacgtcatcagg
acgcgctgccttgtggtctccgctgacggggtcgtggaggtcggcgccgacaagatcaca
cgggccctcctcggcgaaggctgcaaaccgactacgaaccggcaaatccaaaagatgata
gcacctgtccccgaattccagaggcttgtgaacgcgctggcaagggagatgacgcaggaa
gagcgtatacgcctcggaaattcgcgcgaggaagcaatgtcggcattttcagacaggagg
cagaccctgacctctgaaaccgaaacgtatgtccgatggaagcaactcagcattgagcaa
ttgcggtcccgcaacatccaagaccagcaacagatccagatgattgaagggcagatcgcg
gccgaacagagacgcatgcaggcgcgtatatcaggaatgacggatcgattgaggacactt
gaggatacgctggcaaacctcgccaacaactcgatgtcagatacctttgtaatcttggca
agggtcctgccgtcggcccacctcgtgaactaa
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