Pseudooceanicola algae: PSAL_025130
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Entry
PSAL_025130 CDS
T06943
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
palw
Pseudooceanicola algae
Pathway
palw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
palw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSAL_025130 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palw03019
]
PSAL_025130 (recQ)
03400 DNA repair and recombination proteins [BR:
palw03400
]
PSAL_025130 (recQ)
Enzymes [BR:
palw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSAL_025130 (recQ)
Messenger RNA biogenesis [BR:
palw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSAL_025130 (recQ)
DNA repair and recombination proteins [BR:
palw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PSAL_025130 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QPM91260
UniProt:
A0A418SB11
LinkDB
All DBs
Position
complement(2692850..2694892)
Genome browser
AA seq
680 aa
AA seq
DB search
MAEADRLLRDIFGFDAFRPGQQEIVEAVAEGRNTLAIMPTGGGKSLCFQLPALMRHGVTV
VISPLIALMRDQVRALREAGVEAGALTSGNTEEETEAVWSALEAGSLKLLYLAPERLASG
GAMQMLRRINVSLIAVDEAHCVSQWGHDFRPDYLRIGELREMLDVPVAAFTATADEETRA
EIVRRLFADTPPQTFLGGFDRPNIHLAFAAKNSPRKQIVSFATARKGQSGIVYCGTRART
ESIAAGLRDAGMSAIHYHGGMQPDDRREAELQFQQEDGLIVVATVAFGMGVDKPDIRWVA
HSDLPKSIEAYYQEIGRAGRDGAPAETLTLFGPDDIRLRRSQIDEGLAPPERRAADHGRL
NALLGLAEALECRRVKLLGYFGETAVPCGNCDLCDRPPETFDATEPVRKALSAMLRTGEW
FGAGHLVDILTGTETDKVRERGHDKLPTFGVGTEFKKGEWQAIFRQMMGHDLVRPNGERH
GALFMTEAARPILRGEETIRLRRDSLVAAKDRRPATKTLVSEEDEPLLSALKAKRRALAE
EQRVPAYVIFNDKTLIEMAESRPQTLDDMAGISGVGAKKLDAYGDTFLSVIAGDVAPLHP
MRRKLAGRDAASLYDRLMQAQADLARGPDGIDKPLSCSNAVIVRIAETRPTDVASLSRIL
DERRVDRFGDRFLSILQAEE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcagacaggcttctgcgcgacattttcggctttgacgcttttcgccccggc
cagcaggagatcgtcgaagccgtggcggagggccgcaacacgctggccatcatgccgacg
ggcggcggtaagtccctgtgtttccaactgcctgccctgatgcgtcacggggtcacggtg
gtgatctctccgcttatcgcgctgatgcgggaccaggtgcgcgcgttgcgcgaagccggg
gtcgaggccggcgcgctgacctcgggcaataccgaagaagagaccgaagcggtctggtcc
gcgctcgaagccggcagtctgaagctgctttacctcgcgcctgagcggctggcgtcgggc
ggggcgatgcagatgctgcggcggatcaacgtgtcgctgatcgccgtcgacgaagcccat
tgcgtcagtcagtggggccatgatttccgtcccgattacctgcgcatcggcgagctgcgc
gaaatgctcgacgtgccggtcgcggcctttaccgccaccgcggatgaggaaacccgggcc
gaaatcgtccggcggctgtttgcggacaccccgccgcagaccttccttggcggctttgac
cggcccaatatccacctggccttcgcggccaagaattccccgcgcaagcagatcgtcagc
tttgccaccgcccgcaagggccagtcgggcatcgtctattgcggcacgcgggcccgcacc
gaaagcatcgcggcagggctgcgcgacgcgggcatgtcggcgatccactaccacggcggg
atgcagcccgatgaccgccgcgaggccgagcttcagtttcagcaggaagacgggttgatc
gtggtggcgacggtggccttcggaatgggggtcgacaagcccgatatccgctgggtcgcc
cattccgacctgcccaagtcgatcgaagcctattatcaggaaatcggtcgcgccgggcgc
gatggagccccagccgaaaccctgaccctgttcggccccgacgacatccgcctgcgccgc
agtcagatcgacgaaggtctcgcgccgcccgaacgccgcgccgccgatcacggtcggctg
aacgcgctactggggctggccgaggcactggaatgccgccgcgtgaaactgctgggatat
ttcggggaaaccgccgtgccctgcggcaattgcgacttgtgcgaccgcccgcccgagacc
tttgatgcgaccgagccggtgcgcaaggccctgtcggccatgctgcgcacgggcgaatgg
ttcggggccgggcacctggtggacatcctgaccggcacggaaaccgacaaggtgcgtgag
cgcggccatgacaagctgcccaccttcggtgtcgggaccgagttcaagaaaggcgaatgg
caggcgatcttccggcagatgatgggccatgaccttgtgcgcccgaacggcgaacgccat
ggcgcgctgttcatgaccgaagccgcccgcccgatcctgcgcggcgaggaaacgatccgc
ctgcgccgcgacagccttgtcgctgccaaggatcggcgcccggccacgaagacgctggtg
tccgaagaagacgaaccgctgctttccgccctgaaggccaagcgccgcgccctggccgag
gaacagcgggtgccggcctatgtcatcttcaacgacaagaccctgatagagatggcggaa
agccgcccgcagacgctggacgacatggctggaatttccggcgtcggggccaagaagctg
gacgcttatggcgataccttcctgtcggtgatcgcgggcgatgtcgcgcccctgcacccc
atgcggcgcaagctggccgggcgcgatgcggcctcgctttatgatcggctgatgcaggcg
caggccgatctggcgcggggtccggatgggatcgacaagccgctgtcctgctcgaacgcg
gtgatcgtccggatcgctgaaacccgccccacggatgtggcgtctctttcccggatcctc
gacgagcggcgcgtagaccgcttcggtgatcgtttcctttccatcctgcaagcggaagag
tga
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