Pseudooceanicola algae: PSAL_027270
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Entry
PSAL_027270 CDS
T06943
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
palw
Pseudooceanicola algae
Pathway
palw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
palw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSAL_027270 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palw03021
]
PSAL_027270 (rho)
03019 Messenger RNA biogenesis [BR:
palw03019
]
PSAL_027270 (rho)
Transcription machinery [BR:
palw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PSAL_027270 (rho)
Messenger RNA biogenesis [BR:
palw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PSAL_027270 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
AAA_22
ATPase_2
OB_RNB
NACHT
AAA
AAA_25
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QPM91474
UniProt:
A0A418SBH6
LinkDB
All DBs
Position
complement(2924611..2925894)
Genome browser
AA seq
427 aa
AA seq
DB search
MNEIVTENALNLADLKAKSPKDLLAMAEELEIENASTMRKGEMMFQILRELADEDWQIGG
DGVLEVLQDGFGFLRSPEANYLSGPDDIYVSPDMIRQWSLRTGDTVEGLMKAPDENERYF
ALTSVTQINFEEPEKARHKIAFDNLTPLYPDERLKMEVEDPTIRDRSARIIDLVAPIGKG
QRSLIVAPPRTGKTVLLQNIANSIEKNHPEIYLIVLLIDERPEEVTDMQRSVKGEVISST
FDEPATRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDA
NALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKIAD
KRVYPAMDILKSGTRKEDLLVDKVDLQKTFVLRRILNPMGTTDAIEFLISKLKQTKTNSD
FFDSMNT
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagatcgttaccgaaaacgccctgaaccttgctgatctcaaggcaaaaagcccc
aaggatctgctcgccatggcagaggagctcgagatcgagaacgcctcgaccatgcgcaag
ggcgagatgatgttccagatcctccgtgaattggcggatgaggactggcagatcggtggc
gacggcgtgctggaggtcctgcaggatggtttcggcttcctgcgctcgcccgaggcgaac
tacctgtcgggtcccgatgacatctacgtttcgcccgacatgatccgtcaatggtcgctg
cgcaccggggacacggtcgaagggttgatgaaggcgccggacgagaacgagcggtacttt
gccctgacctcggttactcagatcaactttgaagagcctgaaaaggcccgtcacaagatc
gccttcgacaacctgacgccgctatacccggacgagcgcctgaagatggaggtcgaagac
ccgacgatccgcgaccgttccgcccggatcatcgatcttgtcgcgccgatcgggaagggg
cagcggtccttgattgtcgcgcccccgcggaccggtaagaccgttctgttgcaaaatatc
gcgaattcgatcgagaaaaatcacccggagatctatctgatcgtcctgctgatcgacgaa
cgccctgaagaggtgaccgacatgcagcggtcggtgaagggtgaagtgatctcatcgacc
ttcgacgagccggcaacacgccacgtggccgtgtcggaaatggtcatcgaaaaggccaag
cgcctagtcgaacataaacgagatgtagttattcttctggattcgatcacaagacttggt
agggcattcaacacggttgtgccatcgtccggcaaggtcctgaccggcggtgtcgatgcg
aacgctctgcaacgtccgaaacggttcttcggcgctgcccggaatatcgaggaaggtggc
tcgttgaccatcatcgccacagcgctgatcgataccggatcgcggatggacgaagtcatc
ttcgaagaattcaagggaacgggtaactccgagattgttctggatcgcaagattgccgac
aaacgcgtttacccggcgatggacattctcaagtccggcacccggaaagaggatcttctg
gtcgacaaggttgatctgcagaaaaccttcgtattgcgccggatcctgaaccccatgggc
accaccgatgcgatcgagttcctgatttccaagctgaagcagaccaagacaaactcggac
ttcttcgattccatgaacacctga
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