Pseudooceanicola algae: PSAL_027320
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Entry
PSAL_027320 CDS
T06943
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
palw
Pseudooceanicola algae
Pathway
palw03030
DNA replication
palw03430
Mismatch repair
palw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSAL_027320 (dnaQ)
03430 Mismatch repair
PSAL_027320 (dnaQ)
03440 Homologous recombination
PSAL_027320 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palw03032
]
PSAL_027320 (dnaQ)
03400 DNA repair and recombination proteins [BR:
palw03400
]
PSAL_027320 (dnaQ)
Enzymes [BR:
palw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSAL_027320 (dnaQ)
DNA replication proteins [BR:
palw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSAL_027320 (dnaQ)
DNA repair and recombination proteins [BR:
palw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSAL_027320 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QPM91479
UniProt:
A0A418SBJ5
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All DBs
Position
2928958..2929656
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AA seq
232 aa
AA seq
DB search
MREIVMDTETTGFEPEQGDRLVEIGGVELLNHMPTGRTYHVYINPEREVPEEAFKVHGLN
YEFLKDKPLFREVAQDFLDFIGDAKLVIHNAAFDMKFLNAELGWLKMPLIPWEQALDTLA
IARKKYPGSPASLDALCRRFGIDNSSRTLHGALLDSEILAEVYLELIGGRQPDLVLAPTS
DGGHSADGTETWRPRPRPVPLPSRLTESESAAHHSFVEKLGETALWKKLNAG
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaatcgtgatggataccgagacgacagggttcgaacccgaacagggcgaccgt
ctggtcgaaatcggcggtgtcgaactgctgaaccatatgccgacgggccgcacctatcat
gtctacatcaatcccgaacgcgaagtccccgaagaggcgttcaaggtgcacggcctcaat
tacgaattcctgaaggacaagccgctgttccgcgaggttgcgcaggattttctggatttc
atcggtgacgcaaagctggtgatccacaatgcggccttcgacatgaagttcctgaacgcg
gaactgggctggctgaagatgccgcttatcccctgggagcaggcgctggacacgctggcc
atcgcgcgcaagaaataccccggttctccggcgtccctggatgcgctttgtcggcgcttc
ggcatcgacaattcctcgcggaccctgcacggcgcgctgctcgattccgaaatcctggca
gaggtctatcttgagctgatcggcgggcgacaacctgatctggttctggcaccaacctcg
gacggcgggcattccgccgatgggaccgagacatggcgcccccgtccccgcccggtgccg
ctgccatcacggctgacggaaagcgaaagcgccgcccaccacagctttgtcgaaaagctg
ggcgagacggcgctttggaagaaattaaacgctggctga
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