Pseudooceanicola algae: PSAL_028880
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Entry
PSAL_028880 CDS
T06943
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
palw
Pseudooceanicola algae
Pathway
palw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
palw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSAL_028880 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palw03019
]
PSAL_028880 (pnp)
03016 Transfer RNA biogenesis [BR:
palw03016
]
PSAL_028880 (pnp)
Enzymes [BR:
palw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PSAL_028880 (pnp)
Messenger RNA biogenesis [BR:
palw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PSAL_028880 (pnp)
Transfer RNA biogenesis [BR:
palw03016
]
Prokaryotic type
tRNA degradation factors
PSAL_028880 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QPM91633
UniProt:
A0A418SG35
LinkDB
All DBs
Position
complement(3091565..3093700)
Genome browser
AA seq
711 aa
AA seq
DB search
MFNVTTKSMQWGEETLTLETGKVARQADGSVIATLGETSVMANVTFAKKQKEGQDFFPLT
VHYQEKYYAAGKIPGGFFKREARPTEKETLTARLIDRPIRPLFASGFKNEVLVMCTVLSH
DLENDPDVVAMIAASAALTISGAPFMGPIAGCRVGFSGGEYVLNPSVDDMHNLRNNPEQR
LDLIVAGTKDAVMMVESEAYELTEEEMLGAVTFAHEQIQPVLDLIIDLAEETAKEPFAFS
PPDYSDLFAAVKAAGEDKMRAAYAITDKQERTTAVAAVKDDIKAALTEEQLADANLGSAL
KKLESGVLRGDVVKNGKRIDGRATNQVRPIVAETGILPRTHGSSLFTRGETQGLVVTTLG
TGDDEQFIDALHGNFKSNFLLHYNFPPYSVGEVGRVSGPGRREIGHGKLAWRALQAVLPA
ATDFPYTIRIVSEITESNGSSSMASVCGGSLSMMDAGVPLKSAVAGVAMGLVLEDDGDYA
ILTDILGDEDHLGDMDFKVAGTSEGITSLQMDIKVQGITPEIMKTALAQAKEGRMHILGE
MNKALSGAAEFSAHAPRIETMQIPTDKIREVIGSGGKVIREIVETSGAKVDINDDGIIKI
ASSDGEAIQRAYDMIYSIVAEPEEGKIYKGKVVKIVDFGVFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVWVKLVGFDDRGKVRLSMKMVDQQTGEESAKEEAAEE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacgtgacaacgaaatcgatgcagtggggcgaagagacgcttacgctggaaacg
ggcaaggttgcccgccaggccgacggttcggtcatcgccactctgggcgagacttccgtc
atggccaacgtaacgtttgccaagaagcagaaagaaggccaggacttcttcccgctgacc
gtccactaccaggaaaaatactacgccgcgggcaagattcccggcggtttcttcaagcgt
gaggcccgccccaccgagaaggaaaccctgactgcgcgcctgatcgaccgtccgatccgc
ccgctgttcgcctcgggcttcaagaacgaagtcctcgtcatgtgcaccgtgctcagccac
gatctggaaaacgaccccgatgtcgtcgccatgatcgccgcctccgctgcgctgaccatt
tccggcgcgcccttcatgggcccgatcgccggttgccgcgtcggtttctcgggcggcgaa
tatgtgctgaacccgtcggtcgacgacatgcacaacctgcgcaacaaccccgagcagcgt
ctcgacctgatcgtggccggcaccaaagatgccgtgatgatggtcgaatcggaagcctac
gagctgaccgaagaagaaatgctcggcgccgtgaccttcgcccatgagcagatccagccg
gttctggacctgatcattgacctggccgaagagaccgcgaaagagccatttgccttctcg
cccccggattactcggatctgttcgcagccgtgaaagccgctggcgaagacaagatgcgc
gccgcctacgccatcaccgacaagcaggaacggaccactgccgttgccgccgtcaaggac
gacatcaaggccgccctgaccgaagagcagctggctgatgccaacctcggttccgcgctg
aagaagctggaatccggcgttctgcgtggcgatgtcgtgaagaacggcaagcggatcgac
ggccgtgccaccaaccaggtgcgcccgatcgttgcggaaaccggcatcctgccgcggacc
catgggtcgtccctgttcacccgtggcgaaacccagggcctggtcgtgaccacgctggga
accggcgatgacgaacagttcatcgacgcgctgcacggcaacttcaagtcgaacttcctg
ctgcactacaacttccccccctactcggtcggtgaagtcggtcgcgtcagcggtccgggt
cgtcgtgaaatcggccacggcaagctggcatggcgcgccctgcaggctgtcctgcccgcc
gccaccgatttcccctacacgatccgcatcgtgtcggagatcaccgaatccaacggctcg
tcctcgatggcgtcggtctgcggtggttcgctgtcgatgatggatgcaggcgtcccgctg
aagtccgccgttgccggtgtggccatgggcctggtgctggaagacgatggcgactacgcg
atcctgaccgacatcctcggtgacgaagaccacctgggcgacatggacttcaaggttgcc
gggacttccgaaggcatcacctcgctgcagatggacatcaaggtccagggcatcacgccc
gagatcatgaaaactgccctggcccaggccaaggaaggccggatgcacatcctgggcgag
atgaacaaggcgctttcgggtgccgcggaattctcggcacatgccccgcgcatcgaaacc
atgcagatccccaccgacaagatccgtgaagtgatcggctcgggcggcaaggtcatccgc
gagatcgtggaaacctccggcgccaaggtcgacatcaacgacgacggcatcatcaagatc
gcctcgtccgacggtgaagccatccagcgcgcctacgacatgatctattcgatcgtggcc
gagccggaagaaggcaagatctacaagggcaaggtcgtgaagatcgtcgacttcggcgtc
ttcgtgaacttcttcggcaagcgtgacggcctcgtgcacgtttcgcaaatcgagaaccgc
cgcctgaaccacccgtccgacgttctgaaagaaggtcaggaagtctgggtcaagctggtc
ggcttcgatgaccgtggcaaggtccgcctgtcgatgaagatggtcgatcagcaaaccggc
gaagaatccgcgaaggaagaagcggcagaagagtaa
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