Pseudooceanicola algae: PSAL_028920
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Entry
PSAL_028920 CDS
T06943
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
palw
Pseudooceanicola algae
Brite
KEGG Orthology (KO) [BR:
palw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palw03016
]
PSAL_028920 (truB)
Enzymes [BR:
palw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PSAL_028920 (truB)
Transfer RNA biogenesis [BR:
palw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSAL_028920 (truB)
Prokaryotic type
PSAL_028920 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QPM91637
UniProt:
A0A418SG39
LinkDB
All DBs
Position
complement(3095642..3096559)
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AA seq
305 aa
AA seq
DB search
MGRRRKGRDISGWLVVDKPAGLTSNAVVNKVRWALDANKAGHAGTLDPEATGVLAVALGE
ATKTVPFVTDALKAYDFVIRLGQGTNTDDAEGEVIATSDARPSDHDIKEALQGFVGDIEQ
VPPQFSAVKIDGERAYKRARDGEAMEIAARPLFVESLILLDRPDADHARLEMVCGKGGYV
RSIARDLGRVLGCHAHVDHLRRLWSGPFDVAEGIAFAEVERLARTPELDAYLLPLELGLA
DLPEVHATAEGATRLRHGNPGMVIASGLEYGETCWASLNGQPVAVGTFRGGELHPSRVFN
LTEGA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcagacgcaagggacgcgacatttccggctggctcgtggtcgacaagcccgcc
gggctgacctccaacgccgtggtgaacaaggtccgttgggcgctggatgccaacaaggcc
ggccatgcgggcacccttgatcccgaagcgaccggcgtgctggccgttgcccttggcgag
gcgaccaagaccgtgcccttcgtgacggacgcgctgaaagcctatgatttcgtaatccgg
ctgggacagggcaccaataccgacgatgccgaaggcgaggtcatcgcgaccagtgacgcc
cgcccgtcggaccatgacatcaaggaagccctgcaaggcttcgtcggggacatcgaacag
gtcccgccgcagttcagtgcggtgaagatcgacggtgaacgcgcctacaaacgcgcccgc
gacggcgaagcgatggaaatcgcggcccgcccgctgttcgtcgaaagcctgatcctgctg
gaccgccccgatgcggatcacgcccgactggaaatggtctgcggcaagggcggctatgtc
cgttccatcgcgcgggacctggggcgcgtgctgggatgccacgcccatgtggaccacctg
cgccgcctgtggtccgggccgttcgacgtggccgaaggcattgccttcgccgaggtcgaa
aggctggcccgcacgcccgagcttgacgcctatctgctgccgctggaactgggcctggcc
gatctgccagaggtccatgccaccgccgaaggcgccacccgcctgcgtcacggcaacccc
ggcatggtgatcgccagcgggcttgagtacggcgaaacctgctgggccagcctgaatggg
caaccggtcgccgtgggcaccttccggggcggtgaattgcaccccagccgggtgttcaac
ctgaccgaaggcgcatga
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