Pseudooceanicola algae: PSAL_029580
Help
Entry
PSAL_029580 CDS
T06943
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
palw
Pseudooceanicola algae
Pathway
palw03030
DNA replication
palw03410
Base excision repair
palw03420
Nucleotide excision repair
palw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSAL_029580 (polA)
03410 Base excision repair
PSAL_029580 (polA)
03420 Nucleotide excision repair
PSAL_029580 (polA)
03440 Homologous recombination
PSAL_029580 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palw03032
]
PSAL_029580 (polA)
03400 DNA repair and recombination proteins [BR:
palw03400
]
PSAL_029580 (polA)
Enzymes [BR:
palw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSAL_029580 (polA)
DNA replication proteins [BR:
palw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PSAL_029580 (polA)
DNA repair and recombination proteins [BR:
palw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PSAL_029580 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSAL_029580 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
QPM91703
UniProt:
A0A418SG94
LinkDB
All DBs
Position
3164090..3166897
Genome browser
AA seq
935 aa
AA seq
DB search
MAFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVAGFCNMLHRYVEGNTGPDAP
THVAVIFDKGSHTFRNDLYDLYKANRDAMPEDLRPQMPLTREATRAFNIACEEIEGYEAD
DIIATLSCQARDAGGRVTIISSDKDLMQLVGGGVEMLDAMKNLRIDSEGVEAKFGVGPDR
VVDVQALAGDSVDNVPGAPGIGIKTAALLINEYGDLETLLDNAGKIKQPKRRQSLIDNRA
QIELSKRLVTLDCNTPLDFTLDDLEVKDADPEVLLPFLAAMEFRTLTKRIAEQMGAEIPE
IPDTPAAEGAVVVAETPDAPPIEDSRYETITDPETLARWVARACERGVLAIDTETTGLDE
MQVDLVGICLCIDAGHACYIPLQHKAEQGGDGLFGSDDLAPGQMPINLVLDMLKPILADE
SVLKIGQNMKYDAKILKRYGIDVAPFDDTMLISYALNAGLHNHGMDALSERYLSHKPIPI
KELIGSGKSQITFDRVPIDKATRYAAEDADVTLRLWQVLKPRLHREKVTSVYETLERPLS
PVLAHMEMQGIEVDRDTLSRMSNAFAQKMAGLEDEIRELAGEDFNVGSPKQLGEILFDKM
ALPGGKKGKTGAYSTGADILEDLATEHDLPGRVLDWRALSKLKSTYTDALQRYINPETGR
VHTSYVQTGANTGRLASAEPNLQNIPVRSEEGRRIREAFVAPMGKLLVSLDYSQIELRIL
AHVAGIEALKQAFHEGQDIHAATASEMFGVPLEDMTPDVRRQAKAINFGVIYGISGFGLA
RNLRIPRAEAQGFIDRYFERFPGIRDYMDATVAFAKENLFVQTLFGRKIHTPEIGAKGPH
AGFAKRAAINAPIQGTAADIIRRAMIRMPEAIEGLPARMLLQVHDELVFEVDEGATDALV
AAAKSVMEGASLPAIKLDVPLIVDAGQGRNWAEAH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcattcggcaagggctgtcacctgcacctgatcgacggatcggccttcattttccgg
gcctatcacgccctgccaccgctcacgcgtaaatcagacgggctgcccatcggggcggtc
gcgggcttctgcaacatgctgcaccgctatgtcgagggaaacaccggccccgacgccccg
acccatgtggcggtgatcttcgacaagggcagccataccttccgcaacgacctctatgac
ctctacaaggccaaccgcgacgccatgcccgaggatctgcgcccgcagatgcccctgacc
cgcgaagccacccgcgccttcaatatcgcctgcgaggaaatcgagggctacgaggccgac
gacatcattgccaccctgtcctgccaggcccgcgacgcgggcggccgcgtcaccatcatc
tcgtctgacaaggacctgatgcagttggtcggcggtggcgtcgaaatgctcgacgcgatg
aagaacctgcgcattgactccgaaggcgtcgaggccaagttcggcgtcggccccgaccgc
gtcgtcgacgtgcaggccctggccggcgattcggtcgacaacgtcccaggcgcgccgggc
atcggcatcaagaccgctgccctgctgatcaacgaatacggcgacctcgagacgcttctc
gacaatgccgggaagatcaagcagcccaagcgccgccagtccctgatcgacaaccgcgcc
cagatcgaactgtccaaacgcctcgtgacgctcgactgcaacacgccgctcgatttcacc
ctcgacgacctcgaggtgaaggacgccgaccccgaggtcctgctgcccttccttgccgcg
atggaattccgcaccctgaccaagcgcatcgccgaacagatgggcgccgagatcccggaa
atccccgacacccccgcggccgaaggcgcggtggtcgtcgcggaaacccccgacgcacca
cccatcgaagattcgcgttacgagaccatcaccgacccagagacccttgcgaggtgggtg
gcgagggcttgcgagcgcggcgttctggcgatcgacacagaaaccaccgggcttgacgaa
atgcaggtcgatctggttggcatctgtctgtgcattgatgccggccatgcttgttatatc
ccgctgcagcacaaggccgaacaaggcggcgacggcctgttcgggtccgatgaccttgcg
ccggggcagatgccgatcaacctggtgctcgacatgctgaaaccgattctcgcggatgag
tccgtgctgaagatcggccagaacatgaaatacgatgccaagatcctgaagcgctacggg
atcgacgtggcgcctttcgacgacacgatgctcatcagctacgcgctgaatgccgggctg
cacaatcacggcatggatgcgctgtccgaacgctatctgtcgcacaagccgatcccgatc
aaggaactgatcgggtcgggcaagagccagatcaccttcgaccgcgtgccaatcgacaag
gcgacacgctatgccgccgaagatgcagatgtcaccctacgcctctggcaggtgctgaaa
ccccgcctgcaccgcgaaaaggtgaccagtgtctacgagactctcgaacgccccctgtcg
ccggtcctggcacatatggaaatgcaggggatcgaggtcgaccgcgacacgctgtcccgc
atgtccaacgcctttgcccagaaaatggccggtctcgaggacgagatccgagagcttgca
ggcgaggattttaacgtcggctcccccaagcaactgggcgagatcctgttcgacaagatg
gcgcttcccggtggcaagaagggcaagaccggggcctactcgaccggcgcggacatcctc
gaggaccttgcgacggaacatgatctgccgggccgggtgctggactggcgcgcgctgtca
aagctgaaatcgacctataccgacgcgctgcaacgctacatcaatcccgaaacggggcgg
gtccatacctcttacgtgcagaccggggcgaataccggccggctcgcttcggcggaaccg
aacctgcagaacatccctgtgcgctcggaagaaggccgccgcatccgcgaggcctttgtc
gcgccgatgggcaagctgctggtctcgctcgactattcccagatcgaactgcgtatcctg
gcccatgtcgccgggatcgaagcgctgaagcaggccttccacgagggccaggacatccac
gccgccaccgcgtcggagatgttcggtgtgccgctggaagacatgacgccggatgtgcgc
cgacaagccaaggcgatcaatttcggcgtgatctacggcatctcgggctttggcctggcg
cgtaacctgcgtatcccgcgggccgaggcacaggggtttatcgaccgctacttcgaacgc
ttccccggcatccgtgactacatggacgccacggtcgccttcgcgaaggaaaacctgttc
gtgcagaccctcttcggtcgcaagatccatacgccggagattggcgccaagggcccccac
gcgggttttgccaaacgcgccgcgatcaatgcgcccatccagggcaccgccgccgacatc
atccgccgcgccatgatccgcatgccagaggcaatcgaaggccttccggcccggatgctg
cttcaggtccatgacgaactggtcttcgaggtcgatgaaggcgcgaccgatgcactggtc
gcagcagcaaagtcggtcatggagggcgccagccttcccgccatcaagctggacgtgccg
ctgatcgtcgatgcaggacagggccggaactgggccgaagcacattga
DBGET
integrated database retrieval system
