Pseudooceanicola algae: PSAL_036260
Help
Entry
PSAL_036260 CDS
T06943
Symbol
cdhR_3
Name
(GenBank) HTH-type transcriptional regulator CdhR
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
palw
Pseudooceanicola algae
Brite
KEGG Orthology (KO) [BR:
palw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palw03000
]
PSAL_036260 (cdhR_3)
Transcription factors [BR:
palw03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PSAL_036260 (cdhR_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
Motif
Other DBs
NCBI-ProteinID:
QPM92362
UniProt:
A0A418SD58
LinkDB
All DBs
Position
p202:128109..129101
Genome browser
AA seq
330 aa
AA seq
DB search
MQNWPAIMQPRTKSRNVVEVGVLLFPAFSNHCLANAVEPLRAVNSLSGETRYRWRYLSLD
GGEVASSSGLTVRVDSALDRAAGGDYLFVMPSYNAPTLDTPACRLALRGARKRFARVAAL
DTGSWLLAGAGLLDGRRATLHREEQIALAERFPEVEVLADRVVDDGDILSCGGALTSFEL
VLGLIERHHGALMRLEVAALFLDGSTDAPGTLAPPLPGRTAEAAMAIMLRHIETPLPIDR
IATDLGISRKRLESRCRLRYGIRPRELYRALRLREARRLVEGSSLSVAEIAVRCGYGDPS
AMTRAFRLDFGMTPRALRAQRDQKVGPAGA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcagaactggcccgcaatcatgcagccccggacaaaatcccgcaatgtggtcgaggtc
ggggtgctgttgttcccggccttttcgaaccattgtctggccaatgcggtcgaacccctg
cgcgcggtcaattccctgagcggagagacccgttatcgctggcgctacctcagcctcgac
ggaggcgaggtggcgtcctcaagcgggttgacggtgcgggtggacagcgcgctggaccgg
gcggcggggggcgattacctgttcgtcatgcccagctacaacgccccgacgctggacacg
ccggcctgtcggctggcgttgcggggcgcgcgcaaacgcttcgctcgcgtcgcggcgctg
gacaccggcagctggctgctggccggggcgggactgctggacgggcggcgggccactctc
caccgcgaggaacagatcgccctggccgaacgctttcccgaggtcgaggtgctggcggac
cgggtggtcgatgacggcgatatcctgtcctgcggcggggcgctgaccagtttcgaactg
gtgctcgggttgatcgaacgccaccacggcgccttgatgcggctggaggtcgcggcgctg
tttctggatggcagcaccgatgcgccgggcaccctggcgccgccccttcccggacgcacg
gccgaggcggccatggcgatcatgctgcgtcatatcgaaaccccgctgccgattgaccgg
atcgcgacggatctcggcatctcgcgcaagcggctcgaatcgcgctgccggctgcgctat
ggcatccggccgcgcgaattgtaccgggccttgcgcctgcgcgaagcgcggcggctggtc
gaagggtcgtccctgtcggtggccgagatcgcggtgcgctgcggttatggcgaccccagt
gccatgacccgcgcctttcggctggatttcgggatgacaccccgtgccctgcgggcgcag
cgggatcagaaggtcggccccgccggtgcctag
DBGET
integrated database retrieval system
