Entry |
|
Symbol |
polA
|
Name |
(GenBank) DNA polymerase I
|
KO |
|
Organism |
palx Ponticoccus alexandrii
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:palx00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GQA70_01105 (polA)
03410 Base excision repair
GQA70_01105 (polA)
03420 Nucleotide excision repair
GQA70_01105 (polA)
03440 Homologous recombination
GQA70_01105 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:palx03032]
GQA70_01105 (polA)
03400 DNA repair and recombination proteins [BR:palx03400]
GQA70_01105 (polA)
Enzymes [BR:palx01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GQA70_01105 (polA)
DNA replication proteins [BR:palx03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GQA70_01105 (polA)
DNA repair and recombination proteins [BR:palx03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GQA70_01105 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GQA70_01105 (polA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(237692..240499)
|
AA seq |
935 aa
MAGQFGKGCHLHLIDGSAYIFRAFHALPPLTRKSDGLPIGAVSGFCNMLHRYVEGNTGPD
APTHVAVVFDKGSHTFRNDLYDQYKANREAMPEDLRPQIPLTREATEAFNIACKEIEGFE
ADDIMATLACQAREAGGRVTILSSDKDLMQLVGEGVEMLDPMKNKVIDRDGVLEKFGVGP
ERVVDVQALAGDSVDNVPGAPGIGIKTAALLINEFGSLEELLDRAEEIKQPKRRQTLIEK
REQIELSKRLVQLDCDMELPFTLDDLEVKEPDPEVLLGFLTKMEFRTLTKRIADNAGVEA
PAVPEPTAAAEAPEAAPDWPAIDAAAYECVSDMAALERWIARAVDLGTVAVDTETTGLNE
MRCDLVGVSLAVAPGEACYIPLAHLAEDGGEGLFASDAKAEGQIPMDQALAALKPLLEDA
AVMKIGQNMKYDAKVLSRYGIEIAPIDDTMLMSYALHGGEHGHGMDTLSERYLSHTPIPI
KELLGTGKSQITFDRVPLDKATGYAAEDADITLRLALTFKPQLHRARVTRVYETLERPLV
PVLKTMEMAGIAVDRGTLSRMSGKFAQKMAELESEIHELAGEKFNVGSPAQLGDILFEKM
SLPGGKRGKNGKYSTPADVLEDLATEHDLPGRVLDWRQLSKLKSTYTDALQEHINPDTGR
VHTSYVQTGANTGRLASADPNLQNIPVRSEEGRRIREAFVAPEGKVLVSLDYSQIELRIL
AHMAGIDALKEAFREGQDIHAMTASEMFNVPMDEMTPDVRRQAKAINFGVIYGISGFGLA
RNLRIPRAEAQGFIDRYFERFPGIKQYMDDTVAFAQEHKRVETLFGRVIHTPEIGAKGPR
AGFAKRAAINAPIQGTAADIIRRAMVRMPEAIEGLPAKMLLQVHDELLFEVETGAVDDLI
GTARRIMEGAAEPVVKLDVPLVVDAGQGANWAEAH |
NT seq |
2808 nt +upstreamnt +downstreamnt
atggcaggacagttcggcaagggatgccaccttcacctgatcgacggatcggcctacatc
tttcgcgccttccatgcgctgccgccgctgacgcgcaaatccgacgggctgccgatcggt
gccgtgtccggcttttgcaacatgctgcaccgctacgtcgaggggaacaccggccccgac
gcgccgacccatgtcgccgtggtcttcgacaagggcagccacacctttcgcaacgatctg
tacgatcagtacaaggccaatcgcgaggccatgcccgaggacctgcgcccgcagatcccg
ctgacccgcgaggcgaccgaggccttcaacatcgcctgcaaggagatcgagggcttcgag
gcggacgacatcatggcgacgctggcctgtcaggcgcgcgaggccggggggcgggtgacg
atcctgtcgtccgacaaggacctgatgcagcttgtgggcgagggggtcgagatgctcgat
ccgatgaagaacaaggtcatcgaccgcgacggcgtgctggagaagttcggcgtcgggccg
gaacgggtcgtggacgtgcaggcgcttgcgggcgacagcgtcgacaacgtgcccggcgcg
ccggggatcgggatcaagacggcagcgctcttgatcaacgaattcgggtcgctcgaggaa
ctgctcgaccgcgccgaggagatcaagcagcccaagcggcgccagacgctgatcgagaag
cgcgaacagatcgagctgtcgaagcgcctcgtgcagctggattgcgacatggaactgccc
ttcacgctcgacgatctggaggtgaaggagccggaccccgaggtgctgctgggcttcctg
acgaagatggagttccgcacgctgaccaagcggatcgccgacaatgcaggggtcgaggcg
ccagcggtgcccgaacccaccgccgcagccgaggcgcccgaggccgcgccggactggccc
gccatcgacgccgccgcctacgaatgcgtgtcggacatggcggcgctcgaacgctggatc
gcgcgggccgtggaccttggcaccgtggcggtggacaccgagacgaccggcctgaacgag
atgcgctgcgacctcgtcggcgtcagccttgcggtcgcccccggagaggcctgctacatc
ccgctcgcccatctggccgaggacggcggcgaggggctgtttgcctcggacgccaaggcc
gaggggcagatccccatggatcaggcgctggctgcgctgaagccgctgctcgaagacgcg
gcggtcatgaagatcggccagaacatgaagtacgacgccaaggtgctgtcgcgctacggc
atagagatcgcgcccatcgacgacaccatgctcatgtcctacgccctgcacggtggcgag
catgggcacggcatggacacgctgtccgaacgctatctttcgcacacgccgatcccgatc
aaggagctgctaggcaccggcaaaagccagatcaccttcgaccgggtgccgctggacaag
gccaccggttatgccgccgaggatgccgacatcaccctgcgccttgcgctgaccttcaag
ccgcagttgcaccgcgcccgcgtcacgcgggtctacgagacgctcgaacgcccgctggtg
ccggtgctcaagacgatggagatggcgggcatcgcggtcgaccggggcacgctctcgcgc
atgtccggcaagttcgcgcagaagatggccgagctggaatccgagatccacgaacttgcg
ggcgagaagttcaacgtcggctccccggcgcagctgggcgacatcctcttcgagaagatg
agcctgccgggcggaaagcgcggcaagaacggcaagtattccacccccgccgacgtgctc
gaagacctcgcgaccgaacacgacctgccgggccgggtgctggactggcggcagctctcc
aagctgaaatcgacctacacggacgccctgcaagagcacatcaaccccgacaccgggcgg
gtgcatacgtcttatgtgcagaccggagctaacaccgggcgcctcgcctctgccgacccg
aacctgcagaacattcccgtccggtccgaggaaggccgccgcatccgcgaggcctttgtc
gcgcccgagggcaaggtcttggtgtcgctcgactacagccagatcgagttgcgcatcctt
gcccatatggccgggatcgacgcgctgaaagaggccttccgcgaggggcaggacatccac
gccatgaccgcctccgagatgttcaacgtgccgatggacgagatgacgccggacgtgcgg
cggcaggccaaggcgatcaacttcggcgtgatctacggcatctcgggcttcggccttgcg
cgcaacctgcgcattccacgggccgaggcgcagggcttcatcgaccgctacttcgagcgc
ttccccggcatcaagcagtacatggacgacacggtggccttcgcgcaggaacacaagcgc
gtcgagacgctgttcggccgcgtgatccacacgcccgagatcggcgccaaggggccgcgc
gcgggctttgccaaacgcgccgcgatcaatgcgccgattcagggcacggcggcggatatc
atccggcgcgccatggtgcggatgcccgaggcgatcgagggtctgcccgcgaagatgctg
cttcaggtccacgacgaactgctgttcgaggtcgagacgggcgcggtggacgacctgatc
ggcaccgcccgcaggatcatggagggcgcggcggaaccggtggtgaagctggacgtgccg
cttgtggtcgacgccggacagggcgcgaactgggccgaggcacattga |