KEGG   Ponticoccus alexandrii: GQA70_01105
Entry
GQA70_01105       CDS       T08196                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
palx  Ponticoccus alexandrii
Pathway
palx03030  DNA replication
palx03410  Base excision repair
palx03420  Nucleotide excision repair
palx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:palx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GQA70_01105 (polA)
   03410 Base excision repair
    GQA70_01105 (polA)
   03420 Nucleotide excision repair
    GQA70_01105 (polA)
   03440 Homologous recombination
    GQA70_01105 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:palx03032]
    GQA70_01105 (polA)
   03400 DNA repair and recombination proteins [BR:palx03400]
    GQA70_01105 (polA)
Enzymes [BR:palx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GQA70_01105 (polA)
DNA replication proteins [BR:palx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     GQA70_01105 (polA)
DNA repair and recombination proteins [BR:palx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     GQA70_01105 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GQA70_01105 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_5
Other DBs
NCBI-ProteinID: QRF65034
LinkDB
Position
complement(237692..240499)
AA seq 935 aa
MAGQFGKGCHLHLIDGSAYIFRAFHALPPLTRKSDGLPIGAVSGFCNMLHRYVEGNTGPD
APTHVAVVFDKGSHTFRNDLYDQYKANREAMPEDLRPQIPLTREATEAFNIACKEIEGFE
ADDIMATLACQAREAGGRVTILSSDKDLMQLVGEGVEMLDPMKNKVIDRDGVLEKFGVGP
ERVVDVQALAGDSVDNVPGAPGIGIKTAALLINEFGSLEELLDRAEEIKQPKRRQTLIEK
REQIELSKRLVQLDCDMELPFTLDDLEVKEPDPEVLLGFLTKMEFRTLTKRIADNAGVEA
PAVPEPTAAAEAPEAAPDWPAIDAAAYECVSDMAALERWIARAVDLGTVAVDTETTGLNE
MRCDLVGVSLAVAPGEACYIPLAHLAEDGGEGLFASDAKAEGQIPMDQALAALKPLLEDA
AVMKIGQNMKYDAKVLSRYGIEIAPIDDTMLMSYALHGGEHGHGMDTLSERYLSHTPIPI
KELLGTGKSQITFDRVPLDKATGYAAEDADITLRLALTFKPQLHRARVTRVYETLERPLV
PVLKTMEMAGIAVDRGTLSRMSGKFAQKMAELESEIHELAGEKFNVGSPAQLGDILFEKM
SLPGGKRGKNGKYSTPADVLEDLATEHDLPGRVLDWRQLSKLKSTYTDALQEHINPDTGR
VHTSYVQTGANTGRLASADPNLQNIPVRSEEGRRIREAFVAPEGKVLVSLDYSQIELRIL
AHMAGIDALKEAFREGQDIHAMTASEMFNVPMDEMTPDVRRQAKAINFGVIYGISGFGLA
RNLRIPRAEAQGFIDRYFERFPGIKQYMDDTVAFAQEHKRVETLFGRVIHTPEIGAKGPR
AGFAKRAAINAPIQGTAADIIRRAMVRMPEAIEGLPAKMLLQVHDELLFEVETGAVDDLI
GTARRIMEGAAEPVVKLDVPLVVDAGQGANWAEAH
NT seq 2808 nt   +upstreamnt  +downstreamnt
atggcaggacagttcggcaagggatgccaccttcacctgatcgacggatcggcctacatc
tttcgcgccttccatgcgctgccgccgctgacgcgcaaatccgacgggctgccgatcggt
gccgtgtccggcttttgcaacatgctgcaccgctacgtcgaggggaacaccggccccgac
gcgccgacccatgtcgccgtggtcttcgacaagggcagccacacctttcgcaacgatctg
tacgatcagtacaaggccaatcgcgaggccatgcccgaggacctgcgcccgcagatcccg
ctgacccgcgaggcgaccgaggccttcaacatcgcctgcaaggagatcgagggcttcgag
gcggacgacatcatggcgacgctggcctgtcaggcgcgcgaggccggggggcgggtgacg
atcctgtcgtccgacaaggacctgatgcagcttgtgggcgagggggtcgagatgctcgat
ccgatgaagaacaaggtcatcgaccgcgacggcgtgctggagaagttcggcgtcgggccg
gaacgggtcgtggacgtgcaggcgcttgcgggcgacagcgtcgacaacgtgcccggcgcg
ccggggatcgggatcaagacggcagcgctcttgatcaacgaattcgggtcgctcgaggaa
ctgctcgaccgcgccgaggagatcaagcagcccaagcggcgccagacgctgatcgagaag
cgcgaacagatcgagctgtcgaagcgcctcgtgcagctggattgcgacatggaactgccc
ttcacgctcgacgatctggaggtgaaggagccggaccccgaggtgctgctgggcttcctg
acgaagatggagttccgcacgctgaccaagcggatcgccgacaatgcaggggtcgaggcg
ccagcggtgcccgaacccaccgccgcagccgaggcgcccgaggccgcgccggactggccc
gccatcgacgccgccgcctacgaatgcgtgtcggacatggcggcgctcgaacgctggatc
gcgcgggccgtggaccttggcaccgtggcggtggacaccgagacgaccggcctgaacgag
atgcgctgcgacctcgtcggcgtcagccttgcggtcgcccccggagaggcctgctacatc
ccgctcgcccatctggccgaggacggcggcgaggggctgtttgcctcggacgccaaggcc
gaggggcagatccccatggatcaggcgctggctgcgctgaagccgctgctcgaagacgcg
gcggtcatgaagatcggccagaacatgaagtacgacgccaaggtgctgtcgcgctacggc
atagagatcgcgcccatcgacgacaccatgctcatgtcctacgccctgcacggtggcgag
catgggcacggcatggacacgctgtccgaacgctatctttcgcacacgccgatcccgatc
aaggagctgctaggcaccggcaaaagccagatcaccttcgaccgggtgccgctggacaag
gccaccggttatgccgccgaggatgccgacatcaccctgcgccttgcgctgaccttcaag
ccgcagttgcaccgcgcccgcgtcacgcgggtctacgagacgctcgaacgcccgctggtg
ccggtgctcaagacgatggagatggcgggcatcgcggtcgaccggggcacgctctcgcgc
atgtccggcaagttcgcgcagaagatggccgagctggaatccgagatccacgaacttgcg
ggcgagaagttcaacgtcggctccccggcgcagctgggcgacatcctcttcgagaagatg
agcctgccgggcggaaagcgcggcaagaacggcaagtattccacccccgccgacgtgctc
gaagacctcgcgaccgaacacgacctgccgggccgggtgctggactggcggcagctctcc
aagctgaaatcgacctacacggacgccctgcaagagcacatcaaccccgacaccgggcgg
gtgcatacgtcttatgtgcagaccggagctaacaccgggcgcctcgcctctgccgacccg
aacctgcagaacattcccgtccggtccgaggaaggccgccgcatccgcgaggcctttgtc
gcgcccgagggcaaggtcttggtgtcgctcgactacagccagatcgagttgcgcatcctt
gcccatatggccgggatcgacgcgctgaaagaggccttccgcgaggggcaggacatccac
gccatgaccgcctccgagatgttcaacgtgccgatggacgagatgacgccggacgtgcgg
cggcaggccaaggcgatcaacttcggcgtgatctacggcatctcgggcttcggccttgcg
cgcaacctgcgcattccacgggccgaggcgcagggcttcatcgaccgctacttcgagcgc
ttccccggcatcaagcagtacatggacgacacggtggccttcgcgcaggaacacaagcgc
gtcgagacgctgttcggccgcgtgatccacacgcccgagatcggcgccaaggggccgcgc
gcgggctttgccaaacgcgccgcgatcaatgcgccgattcagggcacggcggcggatatc
atccggcgcgccatggtgcggatgcccgaggcgatcgagggtctgcccgcgaagatgctg
cttcaggtccacgacgaactgctgttcgaggtcgagacgggcgcggtggacgacctgatc
ggcaccgcccgcaggatcatggagggcgcggcggaaccggtggtgaagctggacgtgccg
cttgtggtcgacgccggacagggcgcgaactgggccgaggcacattga

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