KEGG   Ponticoccus alexandrii: GQA70_04020
Entry
GQA70_04020       CDS       T08196                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
palx  Ponticoccus alexandrii
Brite
KEGG Orthology (KO) [BR:palx00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:palx02048]
    GQA70_04020
Enzymes [BR:palx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     GQA70_04020
Prokaryotic defense system [BR:palx02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   GQA70_04020
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like DEAD T1RH-like_C SNF2-rel_dom SpecificRecomb
Other DBs
NCBI-ProteinID: QRF65557
LinkDB
Position
850431..853697
AA seq 1088 aa
MGHEYDDVEKPFIDQCVSMGWTAPTGSKHDPALTGRTSFKEVIAEATLRERLRAINPGPD
GQPWLDEARLSEAVSALTRHGHRGLMEANQAVTELLLKGLTVEGLPGWDGGRGQTIRYIA
WDDVAANSFTVANQFRVDCPPGHDVGKGFIIPDVVMLVNGIPVVVVEAKSPAIPEPLAEA
VKQLRRYHNARKAALEVEENEGTPALFASVQLLIATSFDQARVGCIGAGLEHYGQWKTVV
GPDGTGSEDDVIADLGKKGLSEQERLVAGMLRPAHLLDILRHYLLFMNVGGQTIKTVCRY
QQYRAVNRALERLRSGKTRLQDGEYDRRGGIVWHTQGSGKSLTMVFTIRKMRTDLALRKF
KVIMVTDRKDLQRQLSETATLSGDVVEMATSNGSLKKLARRKGPGLVFATIQKYRTDDDV
AGVTKGPAFEVLNEDDTIVVVVDEAHRTQAGDLHANLMAALPNSARIGFTGTPIIMGEKK
KTTKIFGEFIDKYTIKEAEVDGATVPVLYEGRTAEGAVKDGATLDGLFEDMFCGRTEEEL
EAIRKKYATKGNILEAKELIEEKARDMLRHYVTNLLPNGYKAQVVAYSRTAVVRYQAAFL
AARDELQAEAAALSDQDKAMDDEVLCTKPAALQALVQAWRYRDTLEKIEFAAVMSGGNND
DSSWKQWTDGSAQETRIKRFKKPLFHKDATKSDPLAFLIVKSMLLTGFDAPIEGVMYLDR
SIREAELLQAIARVNRTGFGKTCGIVVDYFGVAHHLKAALAAYSDEDIDGALVSLNDQIP
VLQDRHIRVVDIFRRAGLDDLSNDEDCLQVLSTEKARAEFTVKLKDFLKSLEIIFPRPEG
LPFVRDAKRLAYLQARARNRYRDIPVIGEDVGAKVRKLIDDHVISLGIDPKIPPVQLTDA
EFDNQVGHASSGRAKASEMEHAIRSHIRKNLETDPIRFRKMSERLNDILNGFGQQWDQII
EQLQAIIDELRGEASESDETTSDVPEIYLPFLRTVLAACSADETTSTDRLHTLHEMTRLT
VDRIIEEISANRSLWSSFKMADQENLRSEIFEIIFDAQLPGFGVDEAEALADQLMQQAKP
NEDKLRAA
NT seq 3267 nt   +upstreamnt  +downstreamnt
atgggacatgaatacgacgacgtcgaaaagcccttcatcgaccaatgcgtctccatgggc
tggaccgcgccgaccggctcgaagcatgaccccgccctgacgggccgcaccagcttcaag
gaggtcatcgccgaggccacgctgcgcgagcgtctgcgcgccatcaaccccggcccggac
gggcagccctggctcgacgaggcgcgcctttcggaggccgtcagcgcgctcacccgccac
ggccatcgcgggttgatggaggccaatcaggcggtcaccgaacttctgctcaagggcctg
acggtcgaggggctgcccggctgggacggcgggcgcggccaaactatccgctacatcgcc
tgggacgatgtggcggccaacagctttaccgtcgctaaccagttccgcgtcgactgcccg
cccggccatgacgtgggcaagggcttcatcatccccgatgtggtcatgctggtgaacggc
atccccgtggtggtggtcgaagcgaaaagccccgccatccccgaaccgctggccgaggcg
gtcaagcagctgcgccgctatcacaacgcccgtaaggccgcgctggaggtcgaagagaat
gagggcacgcctgcgcttttcgctagtgttcagctgctgatcgccaccagcttcgaccag
gcgcgcgtgggctgcatcggcgcggggctggaacattacggccagtggaagacagtggtc
gggccggatggcacggggtccgaggacgacgtgatcgcggacttgggcaaaaagggcctg
tcggaacaggaacgccttgtcgcggggatgctgcgcccggcgcatctgctggatatcctg
cggcactatctgctgttcatgaacgtgggcggccagaccatcaagaccgtctgccgatac
cagcaataccgcgccgtgaaccgcgcgctggaacgcctgcgcagcgggaagacgcggctg
caggatggcgagtatgaccgccgtggcggcatcgtctggcacacacagggctcggggaag
agcctgaccatggtgttcacgatccgcaagatgcggacggatctggcactgcggaagttc
aaggtgatcatggtcaccgaccggaaagacttgcagcggcagttgtcggagacggcgacc
ctatcgggcgatgtggtcgagatggcaacgagcaacggatcgttgaagaagctggcaagg
cgcaaggggccaggcctggtcttcgccactatccagaagtacaggacagatgatgacgtg
gcgggggttacgaaaggaccggcctttgaggtcctgaacgaggacgacacgatcgtcgtc
gtggtggacgaggcgcatcggacgcaggcgggcgatctgcacgcgaacctgatggccgca
ctgccaaacagtgctcgtatcggcttcaccggcacgccgatcatcatgggggagaagaaa
aaaaccaccaagatcttcggcgagttcatcgacaaatacacgatcaaggaagccgaggtc
gatggtgcgacagtgcctgttctctacgaggggcggaccgccgagggagcggtgaaggac
ggcgctacgctggacggtctgttcgaagatatgttctgcgggcgcacggaagaagagctt
gaggcaatccgcaaaaaatacgcaacgaagggcaacatcctcgaagccaaagagctcatc
gaagagaaagcgcgcgacatgctgcggcattacgtgaccaatctcttgccgaacggatac
aaggcacaggtagtcgcctacagccggacggcagtggtcaggtatcaggccgcttttctg
gcagcccgtgacgagttgcaagcagaggcagcagcgctctctgatcaggacaaggcaatg
gatgacgaggtgctctgcaccaagcctgccgcgcttcaggcgctggtacaggcttggcgc
tatcgggacaccttggagaagatcgagttcgcagcggtcatgtcggggggcaacaacgac
gactcctcatggaagcaatggacggacgggtccgcacaagaaacgcgcatcaaacggttc
aagaagcccctgtttcacaaggatgcaacgaaatcggatccgctggctttcctgatcgtc
aagtccatgctcctgaccgggttcgacgccccgatcgaaggggtgatgtacctcgaccgc
tccatccgcgaggccgagctcttacaggcgatcgctagggtaaacaggacgggcttcggg
aaaacctgcggcatcgtcgtcgattatttcggcgtggcccatcatctgaaggctgccttg
gccgcctattctgatgaggacattgacggcgctttggtcagtctgaatgatcaaatcccg
gttcttcaggatcggcatatccgggtcgtggatattttccgtcgcgcgggccttgatgac
ctttcgaatgacgaggattgcctgcaggtgctttccacagagaaggccagagctgaattc
actgtcaaacttaaggatttcctgaagtcgctggaaatcatttttcctcgcccggaaggg
ttgccgttcgttcgggacgccaaaagacttgcctatttgcaggcccgcgcccgcaatcgg
tatcgcgacatcccggtcatcggggaagatgtcggggccaaagtgcggaagctgattgac
gatcacgtcatttctctcggcatcgacccgaagatcccgcccgtgcaactcacggatgcc
gaattcgacaaccaggttgggcatgcctcaagtggccgggccaaggcctcagagatggag
cacgcgatccgctctcacatacgcaagaaccttgaaactgaccctatacgtttcaggaaa
atgtcggaacgattgaatgatatcctgaatggcttcggccaacagtgggatcagattatt
gaacaactgcaagccatcatcgacgagcttcgcggtgaagccagtgaaagcgatgaaacc
acctcggacgtccctgagatttaccttccattcctccgcaccgtcttggcggcatgttct
gctgatgaaactacctcgactgaccggctccacactttgcacgagatgacacgccttact
gtggaccgcatcattgaagagatcagcgcaaatcgttccttgtggagcagcttcaaaatg
gccgatcaagaaaatctccggtccgagatcttcgagatcattttcgacgcgcaactcccg
gggttcggagttgacgaggcagaagctcttgcagatcagttgatgcagcaagcaaaaccc
aacgaagacaagctgagggcggcgtga

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