Ponticoccus alexandrii: GQA70_07080
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Entry
GQA70_07080 CDS
T08196
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
palx
Ponticoccus alexandrii
Pathway
palx03030
DNA replication
palx03430
Mismatch repair
palx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GQA70_07080
03430 Mismatch repair
GQA70_07080
03440 Homologous recombination
GQA70_07080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palx03032
]
GQA70_07080
03400 DNA repair and recombination proteins [BR:
palx03400
]
GQA70_07080
Enzymes [BR:
palx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GQA70_07080
DNA replication proteins [BR:
palx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GQA70_07080
DNA repair and recombination proteins [BR:
palx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GQA70_07080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
QRF66096
UniProt:
A0ABX7F6D9
LinkDB
All DBs
Position
complement(1481395..1482804)
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AA seq
469 aa
AA seq
DB search
MLANLSLRLRVFLFFCLIALGGALILGASLWAGLSRALTTTPQNGFVLAGILSIFGLTAL
TAGVWLLFDENVAKPIERLSAGMRARAHAGVAVEVDARAARYLGDLGPAASAVTEALAQN
AMSTAQRVAAETERLAQERERLTALLTEIPVAMMLINSAGQIVLYDGQAAEVLSTLGMPR
LNAPLTDYFDAGSLDRARGRVNRSGKEARCVLTSRDGAQSFDARMKPMDAGGYLLIVDAA
HTDIPPDAARPLVYDFALLTARPGEIGDETPLCDLTYTVFDTETTGLLPHKDEIVQLGAL
RVLGGRIVPGETIDQLVDPGRPIPPSATRVHHVTDAMVAGKPDIAEAGRRFHSFAQGSVI
VAHNAPFDMAFLRRHRARMGVEWHNPVLDTVLLSAVLFGASETHTLDALCQRLGVTIPER
LRHTAMGDAQATAEVLIHMLPMLQARGLTTLGAVLAETRRHGRLLEDLN
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgctggccaacctgtcgcttcgcctgcgggtcttcctgttcttctgcctcatcgcgctt
ggcggcgcgctgatccttggcgcatcgctctgggccggcctgagccgggcgctgaccacc
acgccgcagaacggctttgtcctggcaggcatcctgtcgatcttcggactgaccgccctg
accgccggggtctggctgctgttcgacgagaacgtggcgaaacccatcgaacggctgtcg
gcaggaatgcgggcccgcgcccacgccggcgtcgccgtcgaggttgacgcccgggccgcg
cgctacctcggcgaccttggacccgccgcctctgcggtgaccgaggcgctggcgcaaaac
gccatgagcaccgcgcaaagggtcgcggcagagaccgagcggctggcacaggaacgcgaa
cgcctgaccgccctgctgacagagatcccggtggcgatgatgctgatcaacagcgccggg
cagatcgtgctctacgacggacaggccgcagaggtgctgtccaccctcggcatgccccgg
ctgaacgccccgctgacggattacttcgatgcaggctctctggaccgcgcgcgtgggcgg
gtgaaccgctcgggcaaggaggcgcgctgcgtgctgacctctcgcgatggcgcgcaaagc
ttcgacgcccggatgaagccgatggacgcgggcggctacctgctgatcgtcgacgcggcc
cataccgacatcccgccggatgcggcccgcccgctggtctacgactttgccctgctgacc
gcgcgccccggcgagatcggcgacgagacccccctgtgcgacctgacctacaccgtcttc
gacaccgaaacgacgggcctgctgccgcataaggacgagatcgtgcagctgggcgccctg
cgggtgctgggcggccggatcgtgccgggcgagacgatagaccagcttgtcgaccccggc
cgcccgatcccgccttcggccacgcgggtgcatcacgtgaccgacgccatggtcgcgggc
aagcccgacatcgccgaggccgggcggcgctttcacagcttcgcgcagggctcggtgatc
gtggcgcataacgcgcccttcgacatggccttcctgcgccgccaccgggcgcggatgggg
gtcgagtggcataacccggtactggatacggtgcttctgtcggcggtgctgttcggcgcg
tcagaaacgcatacgctggacgccctgtgccagcggcttggcgtcaccattcccgagcgg
ctgcggcacacggcgatgggcgatgcgcaggccaccgcagaggtgttgatccacatgctt
ccgatgcttcaggcgcgcgggctgacgacgctgggcgcggtgcttgcagagacccgccgc
catggccgcctgctcgaagacctgaactga
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