Ponticoccus alexandrii: GQA70_08245
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Entry
GQA70_08245 CDS
T08196
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
palx
Ponticoccus alexandrii
Brite
KEGG Orthology (KO) [BR:
palx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palx03400
]
GQA70_08245
Enzymes [BR:
palx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GQA70_08245
DNA repair and recombination proteins [BR:
palx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GQA70_08245
Prokaryotic type
GQA70_08245
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QRF66297
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Position
1733504..1734925
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AA seq
473 aa
AA seq
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MSKPAPALYWVRRDLRLSDNAALRAAAEGGRPVIPVFIRDSLTLGLGTAPQWRLGLGLGH
FSEALDGKGLRLVLRSGDPVDCLKALVRETGAEAVHWTRAYDPDGVTRDKAVKAALEEQG
ITAQSHTGHLMFQPWTVETKTGGYYKVYTPFWKAVRGLGVNDPLPVPASLSAPATWPDSE
KLDDWRLGAGMRRGAGVVRPYVRLGERAAQSRLGAFMASKVADYGRARDAVAEDGTSCLS
ENLSLGEITPAQCWHAGRRAMEEGNAGAETFLKELVWREFAYHLMWHSPRLLTGNWREDW
DAFPWNEDERLREVKAWKQGRTGVPFVDAAMREMYVTGRMHNRARMIVASYLIKHLMCHW
KIGLKWFEDCLIDWDPASNALGWQWSAGSGPDATPYFRVFNPETQAEKFDSDGTYRDSWI
AEGRGTPTETALSYFDAIPESWPMSARDAYPDPIVGVKEGREKALAAYQNRDF
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacccgctcctgccctgtattgggtgcgccgcgatctgcggctgtccgacaat
gccgccctgcgcgccgccgcagagggtgggcgcccggtcatcccggttttcatccgcgac
agcctgaccttgggtctgggcacggcgccgcaatggcggctggggctgggccttgggcat
ttctcggaggcgctggacggcaaggggcttcggctggtcctgcggtccggcgatccggtc
gattgcctgaaggcgctggttcgggaaaccggcgccgaggcggtgcactggacccgcgcc
tacgatcccgacggcgtgacccgcgacaaggcggtgaaggccgcgctggaagagcaggga
atcaccgcgcaaagccacaccggccacctgatgtttcagccatggacggtcgagaccaag
accggcggctattacaaggtctatacgccgttctggaaggcggtgcggggccttggggtc
aacgaccctctgcccgtgcccgccagcctgagtgccccggcgacatggcccgacagcgaa
aagctggacgattggcgccttggtgccgggatgcggcgcggtgccggggtcgtccggccc
tacgtgcggcttggcgagcgtgccgcgcagagccgtctgggggcgttcatggcctcgaag
gtggcggactatgggcgtgcgcgcgacgccgtggccgaggacggcacctcttgcctgtcc
gagaacctcagccttggagagatcacgcccgcgcagtgctggcacgccgggcgccgggcc
atggaagagggcaatgcgggggccgagaccttcctgaaggaactggtctggcgcgagttc
gcctatcacctgatgtggcattcgccgcgcctgctgaccggcaactggcgcgaggattgg
gacgcctttccgtggaacgaggacgagcgtctgcgcgaggtcaaggcgtggaagcagggg
cgcaccggggtgcccttcgtggatgcagccatgcgcgagatgtacgtgacgggccggatg
cacaaccgcgcgcggatgatcgtggcaagctacctgatcaagcacctgatgtgccactgg
aagatcggcctcaagtggttcgaggattgcctgatcgactgggacccggcctcgaacgcg
ctggggtggcagtggtcggcgggctccggcccggatgcgacgccttacttccgcgtgttc
aaccccgagacacaggccgaaaagttcgactctgacggcacctaccgcgacagctggatc
gccgaggggcgcgggacgccgacggaaacggcgctgtcctacttcgatgcgattcccgaa
agctggccaatgtccgcgagggacgcctacccggaccccatagtcggcgtgaaggaaggg
cgggagaaggcgctggctgcctatcagaaccgtgacttctga
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