Ponticoccus alexandrii: GQA70_09225
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Entry
GQA70_09225 CDS
T08196
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
palx
Ponticoccus alexandrii
Brite
KEGG Orthology (KO) [BR:
palx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palx03016
]
GQA70_09225 (rnd)
Enzymes [BR:
palx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GQA70_09225 (rnd)
Transfer RNA biogenesis [BR:
palx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GQA70_09225 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
KI67R
Motif
Other DBs
NCBI-ProteinID:
QRF66473
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All DBs
Position
1923033..1924193
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AA seq
386 aa
AA seq
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MRTLTTTEDLAAFCEEAKGQPYITVDTEFLRERTYYSKLCLVQLALPGQGDENAVLVDPL
VEGLSLDPLMDLFRDESIVKVFHAARQDLEIFHIDNGVIPRPLFDTQVAAMVCGFGEQVG
YETLVRKIAKQQLDKSSRFTDWSRRPLTDAQKTYALADVTHLRQIYEYLAAQLEKTGRDR
WVAEELAVLTDPETYVTHPEDAWKRIKTRSNSPRFLAIVQELAAFRETHAQTRNVPRNRV
FKDDALVELASTKPADMADLGRSRLLLREARKGDIADGILAAVKAGQERPKDGLPQIDKS
RDKMQVNPALADLLRVLLKAKTESSGVASKLIAPAADLDAIAAGERDVAALKGWRKEVFG
EDALRLCDGRIALTAKGVDVKVIELD
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcggacattgacgacgaccgaagatctcgcagcattctgcgaagaggccaagggccaa
ccctatatcaccgtcgacacggaattcctgcgcgaacggacctattattccaagctctgc
ctcgtgcagctggccttgcctggccagggcgacgagaatgcggtgctggtcgatccgctg
gtcgaggggctgtcgctggacccgctgatggacctcttccgggatgagagcatcgtcaag
gtcttccacgccgcgcggcaggatctggagatcttccatatcgacaacggcgtgatcccc
cggcctcttttcgacacgcaagtggcggccatggtctgcggtttcggcgaacaggtcggc
tatgagacactggtccgcaagatcgccaagcagcagctcgataaaagctcgcgcttcacc
gactggtcccggcgcccgctgactgacgcgcagaagacctatgcgctggccgatgtgacg
cacctgcggcagatctacgaatacctcgccgcgcagcttgagaagaccgggcgcgaccgc
tgggtggccgaggaactggcggtgctgaccgatcccgagacctatgtgacccatcccgag
gatgcctggaagcggatcaagacccggtccaactcgccgcgctttctggccatcgtgcag
gaactggccgccttccgcgaaacccatgcccagacccgcaacgtgccgcgcaaccgcgtg
ttcaaggacgacgcgctggtcgaactggcctcgaccaaacccgccgacatggccgacctt
ggccgctcccgcctgctgctgcgcgaagcgcgcaagggcgatatcgcagatggtatcctt
gctgccgtgaaggccgggcaggagcgtccgaaggacggcctgccgcagatcgacaagagc
cgcgacaagatgcaggtgaacccggcgctggcggatctcctgcgggtgctgctgaaggcc
aagaccgaaagctcgggcgtggcctcaaagctgatcgctcccgctgccgaccttgatgcg
atcgctgccggggaacgcgatgtcgcggccctgaaaggctggcgcaaggaggtcttcgga
gaggacgccctgcggctctgcgacggcaggatcgccctcactgccaagggcgtcgacgtc
aaggtcatcgagctggactaa
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