Ponticoccus alexandrii: GQA70_11910
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Entry
GQA70_11910 CDS
T08196
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
palx
Ponticoccus alexandrii
Brite
KEGG Orthology (KO) [BR:
palx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
palx01002
]
GQA70_11910
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
palx01011
]
GQA70_11910
Peptidases and inhibitors [BR:
palx01002
]
Cysteine peptidases
Family C82
GQA70_11910
Peptidoglycan biosynthesis and degradation proteins [BR:
palx01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
GQA70_11910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PolyA_pol_RNAbd
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
QRF66956
LinkDB
All DBs
Position
complement(2488488..2490116)
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AA seq
542 aa
AA seq
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MTVFRIRTALRTTVAALAFGLAGATAGLAQDDGISVKITAYAQAVAETIGEDEGIAAFYR
ARGFDPIWTGSSDADRARRLALIEAFALADDHGLPRGRYDPDRLMERLAGVSGGRDRGLL
EIELTRTFLQFAHDLQSGVLEPGKASSLIKRKAPRRSSEELLTLLSTQPPESVFRMLVPS
SPEYTRLMQAKLRLEHRLQHGGWGPVVPTASLRPGESGNTVVALRNRLVAMGYLQPSLSA
TYDGRIEAAVREFQVDHGLEPDGVAGNTTMREINTAPEERLRSIMVAMERERWLNLPEGR
GQRHILVNLVDYHAQIIDDDKLTFETKSVIGHQAADRQTPEFSDVMDHMVINPSWYVPRS
IIVGEYLPLLRSNPYSVGHIEVVTASGQVVNRAQGFSQYSSRSFPFNMRQPPGPNNALGS
VKFMFPNRYNIYLHDTPSQHLFSQPVRTYSHGCIRLDDPHDFAYALLAKQVDNPESYFHG
ILNTRRETRVNLEQPVPVHLIYRTAFTQAKGQVNYRPDVYNRDAAIWRALANEGVVLRAG
QS
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgacagttttcaggatcaggacggcgctgcggacaacggtcgcggccctggctttcggc
ctcgccggggcaacggcgggattggcgcaggatgacgggatctcggtcaagatcaccgca
tatgcgcaggccgtggccgagaccatcggcgaggatgagggcattgcagccttctaccgc
gcccgcggcttcgacccgatctggaccgggtcttcggatgcggaccgtgcgcgcaggctg
gccctgatcgaggccttcgcgctggccgacgatcacggtcttccgcgcgggcgctacgat
cccgaccgcctgatggagcgccttgccggggtctcgggcggacgggatcgcggcctgctg
gaaatcgagctgacccgcaccttcctgcaattcgcccacgacctgcaatccggcgtcctt
gagccgggcaaggcctcgtcgctgattaagcgcaaggcgccacggcggtcctcggaagag
ctactgaccctcctttccacccagcctccggaatccgtctttcggatgctcgtgccttcg
agccccgagtacacgcgcctgatgcaggccaagctgcggctggagcaccggcttcagcat
ggcggttgggggcctgtcgtcccgacggcgagcctgcgtccgggcgagtccggcaatacg
gtggtggcgctgcgcaaccggcttgtcgcgatgggctatcttcagccctcgctgagcgcc
acctacgatggacggatcgaggccgcggtccgcgaattccaggtcgatcacgggctggag
ccggacggcgtcgccggcaacaccaccatgcgcgagatcaacaccgctcccgaagagcgg
ctgcggtcgatcatggtcgcgatggagcgcgagcgctggctgaacctgcccgaggggcgg
ggccagcggcacatcctcgtgaacctcgtcgactatcacgcgcagatcatcgacgacgac
aagctgactttcgagaccaagtcggtgatcggccatcaggccgccgaccggcagacgccc
gagttctcggacgtcatggatcacatggtcatcaacccgtcgtggtacgtgccgcgctcg
attattgtcggagaatacctgccgttgctgcgctcgaacccctattcggtcggacatatc
gaggtggtcaccgcctcggggcaggtggtgaaccgtgcgcaaggcttctcgcagtattcc
tcgcgcagcttcccgttcaacatgcgccagccgccgggaccgaacaacgcgcttgggtcg
gtcaagttcatgttccccaaccgctacaacatctacctgcacgacacgccctcgcagcat
ctgttctcgcagccggtgcggacttacagccatggctgcatccgtctcgacgatccgcat
gacttcgcctacgcgctgctcgccaagcaggtcgacaaccccgagagctatttccacggc
atcctgaacacccggcgcgaaacccgggtcaatctggagcagcccgtgcccgtgcacctg
atctaccgcaccgcgttcacgcaggcgaaggggcaggtgaactaccgtcccgacgtctac
aaccgggacgcggcgatctggcgcgcgctggccaacgagggggtggtcctgcgggccggt
caaagctaa
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