Ponticoccus alexandrii: GQA70_11940
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Entry
GQA70_11940 CDS
T08196
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
palx
Ponticoccus alexandrii
Brite
KEGG Orthology (KO) [BR:
palx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
palx03009
]
GQA70_11940 (rimK)
Ribosome biogenesis [BR:
palx03009
]
Prokaryotic type
ribosomal protein modification factors
GQA70_11940 (rimK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
Zn_protease
GSH-S_ATP
ATP-grasp_3
ATPgrasp_ST
LysX_preATP_grasp
gag-asp_proteas
GARS_A
TTL
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
QRF66960
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Position
2493440..2494855
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AA seq
471 aa
AA seq
DB search
MSDTSEPAAGMIRFGWEEWVALPDLGLPALRAKVDTGARTSALHAFDIETFGPASAPKVR
FTVHPVPGRDDLVIPCSARIVDRRTVTSSNGESESRYVIASTLRVGEESWRIELTLTDRS
GMNSRMLLGREALKDHITIVATDRFQQPKLSYDVYTTARVRHAAPNRALRVAVLSREDNY
STRRLVEEGEERGHTVEVIDTTRCYMAINALSPEVHYDGKRLPRYDVVIPRIGASITSYG
TAVIRQFETIGTFCVNGSDGITSSRDKLAAHQMMARHKIGMPNTAFAASPKDTQSLMRLV
GTAPLIVKLLESTQGKGVVLAETKKAAESVIDAFRGLKANFLVQDFVKEAAGEDIRCLVV
GGKVVAAMKRTGAEGDFRSNLHRGGSAQVARITKEERETAVRAARAFRLNLAGVDLLRSE
TGPKVLEVNSSPGLEGIETATHKNIAGLLYEHIEAKVRPTPVRARKTMDSE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacacctctgaacccgccgccggtatgatccgttttggctgggaggaatgggtc
gccctgcccgacctcggcctgcccgcgctgcgcgccaaggtcgacaccggcgcccgcacc
tcggcgctgcacgccttcgacatcgaaaccttcggcccggcctcggcgcccaaggtgcgg
ttcaccgtgcaccctgtcccgggccgcgacgatctggtgattccctgctcggcccggatc
gtcgaccggcgcaccgtcacctcttcgaacggcgaatccgaaagccgctacgtcatcgcc
tcgaccctgcgggtgggcgaggaaagctggcggatcgaactgacgctgaccgaccgctcg
ggcatgaactcgcgcatgctgctgggacgggaggcgctgaaggaccacatcaccatcgtc
gccaccgaccgctttcagcagccgaaactgtcctacgacgtctacaccaccgcccgcgtc
cgccatgccgccccgaaccgcgcgctgcgcgtggcggtgctgagccgcgaggacaactat
tccacccgccgtctggtcgaagagggcgaagagcgtggtcacacggtcgaggtcatcgac
accacgcgctgctacatggcgatcaacgcgctttcgcccgaggtgcattacgacggcaag
cgcctgccccgttacgacgtggtgattccgcgtattggggcctcgatcacctcttacggc
accgccgtgatccgccagttcgagaccatcggcaccttctgcgtcaatggctctgacggc
atcacctccagtcgcgacaaactggcggcacaccagatgatggcacggcacaagattggc
atgcccaacactgcctttgccgcctcgcccaaggacacccagtcgctgatgcgccttgtc
ggcaccgcgccgctgatcgtgaagctgctggaatcgacgcagggcaagggcgtcgtgctg
gcagagaccaagaaggccgccgaatctgtcatcgacgcctttcgcggcctgaaggccaac
ttcctcgtgcaggatttcgtcaaggaagctgccggggaagacatccgctgcctcgtcgtc
ggcggcaaggtcgtggccgcgatgaagcgcaccggggccgagggcgactttcggtcgaac
ctgcaccggggcggctcggctcaggtggcgcggatcaccaaggaagagcgcgagaccgcc
gtgcgcgccgcccgagccttccgcctaaaccttgccggagtggacctgctacgctcggaa
accgggccgaaggtgctggaagtgaactccagccccggcctcgaaggcatcgaaacagcc
acacacaagaacatcgccggtctgctttacgagcacatcgaggccaaggtccgccccacc
ccggtgcgggcgcgcaagaccatggacagcgaatag
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