Ponticoccus alexandrii: GQA70_15170
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Entry
GQA70_15170 CDS
T08196
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
palx
Ponticoccus alexandrii
Pathway
palx03030
DNA replication
palx03430
Mismatch repair
palx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GQA70_15170 (dnaE)
03430 Mismatch repair
GQA70_15170 (dnaE)
03440 Homologous recombination
GQA70_15170 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palx03032
]
GQA70_15170 (dnaE)
03400 DNA repair and recombination proteins [BR:
palx03400
]
GQA70_15170 (dnaE)
Enzymes [BR:
palx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GQA70_15170 (dnaE)
DNA replication proteins [BR:
palx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GQA70_15170 (dnaE)
DNA repair and recombination proteins [BR:
palx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GQA70_15170 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
QRF67532
LinkDB
All DBs
Position
complement(3184395..3187895)
Genome browser
AA seq
1166 aa
AA seq
DB search
MADPRFIHLRTHTEYSLLEGAIRLKKLPGLCQAMEMPAVAVTDTNNLFAALEFSVGASGA
GVQPIIGCQMDLRYIDPAPGERVKPPAPVVLLAQTERGYEHLMKLNSCLYMRRDTELAHI
TLDELERHSEDVICLSGGPDGPVGRLLRQSTRAAAQTLMMRLEGIFGDRLYVELQRHPGE
DGQPTEAERMTERGHVEMAYEMGLPLVATNDVYFPKSDMYEAHDAMICIAEGAYVDQQEP
RRRLTPQHYLKTPQEMAVLFADLPEALENTVEIARRCAFMAYRRDPILPKFADDEVAELR
RMANDGLQARLAVIPHAVSVEEYQKRLDFELGIIEGMGFPGYFLIVADFIQWSKDNNIPV
GPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREETIRYV
QDKYGHDRVGQIITFGALLSKAAVRDMGRVLQMPYGQVDRLSKMIPVEGVKPVSIEQALR
DEPRLAEEARNEEVVDRLLKYGMQVEGLLRSAGTHAAGVVIADRPTDELVPLYRDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQNALDLILKSGRPLHVAADGTELYQPAEGGE
NQMNLIPLDDEPTYKLYASAKTVAVFQVESSGMMDALKRMKPTCIEDIVALVALYRPGPM
ENIPTYCEVKNGLREITSVHPSIDHILAETQGIIVYQEQVMQIAQEMAGYTLGGADLLRR
AMGKKIKEAMDAERPKFTKGAMANGVDEKKAKEVFDLLEKFANYGFNKSHAAAYAVVSYQ
TAWLKANHPVEFMAGVMNCDIHLTDKLAIYFEEVRKGLSLPYVPPCVNRSQATFDVKDGE
LVYALGALKNVGVEAMRLVVEGRGERPFATLYDFARRVDLKKIGKRPLEMMARAGAFDVL
DGNRRRVFDSLDALVMYSSAIHEQKASAQVSLFGEAGDDLPEPRMSPVSDWLPAERLAEE
FRAVGFYLSGHPLDDYMPALKRQQVMTLDEVTAKAERGPFVAKLAGVVAGRQERKSARGN
RFAFAQLSDPTGAYEVTLFSETLEKSREFLETGSKVVVTVEATMESDQLKLLGRSVTPAD
TLTAGAGASGLRIFVETETAFGQIAKVLSWAAEQNPKAPRGPIHLCLTDRGLPGEVELDL
SDQFPVSPEVKGAVKSLEGVMAVEDF
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggccgatccccgattcatacacctccgcacccacaccgaatattcgctgctcgaaggc
gccatccgcctgaagaagctgcccggcctctgtcaggcgatggaaatgccggcggtggcc
gtcaccgacaccaacaacctctttgccgcgctggaattctctgtcggggcgtcgggcgcg
ggcgtgcagccgatcatcggctgccagatggacctgcgctacatcgacccggcgccgggc
gagcgggtgaagccgcccgcgccggtggtcctgctggcccagacggaacgcgggtacgag
catctgatgaagctcaactcgtgcctatacatgcgccgggacaccgaacttgcgcatatc
acgctggatgagctggaacggcactccgaggatgtgatctgcctgtccggcggccccgac
ggcccggtgggcaggctgcttcggcagtccacccgcgccgccgcgcagacgctgatgatg
cggctggaggggatcttcggcgaccggctttacgtggagctccagcgccaccccggcgag
gatgggcagccgacggaagccgaacggatgaccgaacgcggccatgtcgagatggcctat
gaaatgggcctgccgctggtcgccaccaatgacgtctatttccccaagtccgacatgtac
gaggcccacgatgcgatgatctgcatcgccgagggcgcctatgtcgaccagcaggaaccg
cgccgccgcctgaccccgcagcactacctgaagaccccgcaggagatggcggtgctgttc
gccgaccttcccgaggcgctggagaacaccgtcgagattgcccgccgctgcgccttcatg
gcttaccgccgcgacccgatcctgccgaagttcgccgacgacgaggtggccgaactgcgc
cgcatggccaatgacggtcttcaggcccgccttgcggtgatcccgcacgcggtcagcgtc
gaggaataccagaagcggctggatttcgagctgggcattatcgagggcatgggctttccc
ggctacttcctgatcgtggccgacttcatccagtggtccaaggacaacaacatccccgtc
gggccggggcggggctcgggcgcgggctcgctcgtcgcctatgcgctgacgatcaccgac
ctcgacccgctacgctactcgctgctgttcgagcgcttcctgaacccggaacgggtctcg
atgcccgacttcgacatcgacttctgcatggaccggcgcgaagagacgattcgctacgtg
caggacaaatacggccacgaccgcgtggggcagatcatcaccttcggcgcgcttttgtcc
aaggccgccgtgcgcgacatgggtcgcgtcttgcagatgccttacgggcaggtggatcgc
ctgtccaagatgatcccggtcgagggcgtcaaacccgtcagcatcgagcaggcgctgcgg
gacgagccgcgcctcgccgaagaggcccgcaacgaggaagtcgtggaccgcctgctgaaa
tacggcatgcaggtcgaggggctcttgcgcagcgccggtacgcacgcggcgggcgtggtc
atcgccgaccggcccaccgacgagttggtgccgctgtatcgcgatccgcgctcggacatg
cccgccacccagttcaacatgaagtgggtggagcaggcgggtctggtgaagttcgacttc
ctcggcctgaagaccctgaccgtcattcagaacgcgttggacctgatcctgaagtctggc
cgccccctgcatgtcgccgccgatggcaccgagctgtaccaaccggcggagggcggcgag
aaccagatgaacctgatcccgctggacgacgagccgacctacaagctttacgccagcgcc
aagaccgtcgccgtgttccaggtggaaagctcgggcatgatggatgcgctcaagcgcatg
aagcccacttgcatcgaggacatcgtcgcgctcgtggcgctctatcgtcccggcccaatg
gagaacatccccacctactgcgaggtcaagaacggcctgcgcgagatcacctctgtgcac
ccttcgatcgaccacatccttgccgagacgcagggcatcatcgtctatcaggaacaggtg
atgcagatcgcgcaggaaatggccggctatacccttggcggcgccgacctgctgcgccgc
gccatgggcaagaagatcaaagaggcgatggacgccgagcggcccaagttcaccaagggc
gccatggccaacggcgtggacgagaagaaggccaaggaggtcttcgaccttctggagaaa
ttcgccaactacggtttcaacaagtcccacgcggcggcctatgcggtggtcagctaccag
accgcttggctgaaggcgaaccacccggtggagttcatggcgggcgtcatgaactgcgat
atccacctgacggacaagctggcgatctacttcgaagaggtccgcaagggcctgtcgctg
ccctacgtcccgccctgcgtgaaccgctctcaggccaccttcgacgtcaaggacggagaa
ctggtctatgcgctgggcgcgctgaagaacgtgggcgtggaggcgatgcggctggtggtc
gagggacggggggaacgccccttcgccacgctttacgatttcgcccggcgggtggacctg
aagaagatcggcaagcggccgctggagatgatggcgcgggccggggccttcgacgtgctc
gacggcaaccgccgccgggtcttcgattcgctggatgcgctggtgatgtactcttcggcg
atccacgaacagaaggcctcggcgcaggtctcgctttttggcgaggcgggcgacgacctg
ccggaaccgcgcatgtcgccggtcagcgactggctgcccgccgaacggctggcagaggaa
ttccgcgccgtgggcttctacctctcggggcacccgctggacgactacatgcccgcgctg
aagcgccagcaggtgatgacgctggacgaggtgaccgccaaggccgaacgcggccccttc
gtggccaagctggcgggcgtcgtcgcggggcggcaggaacggaagtcggcgcgcggcaac
cgctttgcctttgcgcagctgtcggacccgaccggcgcctacgaggtgacgctgttctcg
gagacgctggagaaatcgcgcgaattcctcgaaaccgggtcgaaggtcgtcgtgacggtc
gaggccacgatggaaagcgaccagctgaaattgctgggccgctcggtcacgcccgccgac
acgctgacggcgggggccggggcctccggcctgcggatcttcgtcgagaccgaaaccgcc
ttcggccagatcgccaaggtcttgtcatgggccgccgagcagaaccccaaggcgccgcgc
gggccgatccacctgtgcctgaccgaccgcggcctgccgggagaggtggagctggacctc
tccgaccagttcccggtctcgcccgaggtcaagggcgcggtcaaatcgctggagggcgtc
atggcggtcgaggatttctag
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