Ponticoccus alexandrii: GQA70_15790
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Entry
GQA70_15790 CDS
T08196
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
palx
Ponticoccus alexandrii
Brite
KEGG Orthology (KO) [BR:
palx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palx03032
]
GQA70_15790
03036 Chromosome and associated proteins [BR:
palx03036
]
GQA70_15790
03400 DNA repair and recombination proteins [BR:
palx03400
]
GQA70_15790
DNA replication proteins [BR:
palx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GQA70_15790
Chromosome and associated proteins [BR:
palx03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GQA70_15790
DNA repair and recombination proteins [BR:
palx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GQA70_15790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
PqqD
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QRF67642
LinkDB
All DBs
Position
complement(3312970..3313260)
Genome browser
AA seq
96 aa
AA seq
DB search
MATKPMTKTQLVAALAEKMDADKKTAGAALDSIVEIITSEVAAGGAVTLPGVGKIYCKER
PERMVRNPATGEQFKKEADKQVKMTIAKALKDSVNG
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaaaccgatgacgaagacccagctggtcgcagcactggccgagaagatggat
gcggacaagaagaccgccggcgcggcgctcgactcgattgtcgagatcatcacctcggaa
gtggccgcaggcggcgccgtgaccctgccgggcgtcggcaagatctactgcaaggagcgc
cccgagcgcatggttcgcaaccccgcgaccggcgagcagttcaagaaggaagccgacaag
caggtcaagatgaccatcgctaaggctctgaaggacagcgtcaacggctga
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