Ponticoccus alexandrii: GQA70_16870
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Entry
GQA70_16870 CDS
T08196
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
palx
Ponticoccus alexandrii
Pathway
palx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
palx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GQA70_16870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palx03021
]
GQA70_16870
03400 DNA repair and recombination proteins [BR:
palx03400
]
GQA70_16870
Enzymes [BR:
palx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GQA70_16870
Transcription machinery [BR:
palx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GQA70_16870
DNA repair and recombination proteins [BR:
palx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GQA70_16870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF211
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
QRF67828
LinkDB
All DBs
Position
complement(3529851..3530867)
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLEIKPGADPSRQATVIAEPLERGFGLTLGNALRRVLLSSLQGAAIT
SVQIDNVLHEFSSVDGVREDVTDIILNLKQVALRMEVEGPKRLSVSAKGPGVVTAGDISE
TNGIEVLNRDHVICHVDEGAEVYMEFTVNLGKGYVSADKNKPEDAPIGLIPIDAIYSPVK
KVAYDVQPTREGQVLDYDKLTMKIDTDGSITPEDAVAFAARILQDQLSIFVNFDEPESAQ
RHDDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKLEDSF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaactgggccgaactgatcaagccgacacagctggagatcaagcccggc
gccgacccgtcccggcaggccactgtcatagccgaaccgctggagcgcggcttcggtctg
accctcggcaacgcgctgcgtcgcgtgctgctgtcctcgcttcagggtgcggccatcacc
tctgtgcagatcgataacgtcctgcacgagttctcctcggtggacggtgtccgcgaggat
gtgaccgacatcatcctgaacctgaagcaggtcgccctgcggatggaagtcgaagggccc
aagcgcctgtccgtctccgccaagggcccgggtgtcgtcaccgccggtgacatctcggaa
accaacggcatcgaggtcctgaaccgcgatcacgtgatctgtcacgtggacgagggtgca
gaggtttacatggaattcaccgtgaacctcggcaagggttatgtttcggctgacaagaac
aagcccgaggacgcaccgatcggcctgattccgatcgacgcgatctactcgccggtgaag
aaggtcgcttacgacgtgcagcccacccgcgaggggcaggtgctggactacgacaagctg
accatgaagatcgacaccgacggctcgatcacgcccgaggacgccgtggccttcgccgca
cgcatcctgcaggatcagctgtcgatcttcgtcaacttcgacgagccggaatcggcacag
cgtcacgacgacgacgacggtctggagttcaacccgctgctgctgaagaaggtcgacgag
ctggagctctcggtccgttcggcaaactgcctgaagaacgacaacatcgtctacatcggc
gacctgatccagaagaccgaagcagagatgctacgcaccccgaacttcggccgcaagtcc
ttgaacgagatcaaggaagtgctgtcgggcatgggtctgcaccttggcatggacgtcgag
gactggccgccggacaacatcgaagatctggccaaaaagctggaagactcgttctga
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