Ponticoccus alexandrii: GQA70_17095
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Entry
GQA70_17095 CDS
T08196
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
palx
Ponticoccus alexandrii
Brite
KEGG Orthology (KO) [BR:
palx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palx03016
]
GQA70_17095 (truB)
Enzymes [BR:
palx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GQA70_17095 (truB)
Transfer RNA biogenesis [BR:
palx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GQA70_17095 (truB)
Prokaryotic type
GQA70_17095 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QRF67870
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All DBs
Position
3564530..3565438
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AA seq
302 aa
AA seq
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MARKRKGRDISGWLIVDKPAGMTSTAVVNKVRWALEAKKAGHAGTLDPEATGLLAVALGE
ATKTVPYITDALKAYAFTVRLGQATNTDDTEGEVISTSDLRPTDDEIKAALGTFVGEIQQ
VPPQFSAVKMDGERAYKRARDGEDMDLAARPLWVEELLLADRPDADTAMLEMTCGKGGYV
RSIARDLGAALGCHGHVLTLRRLWSGPFDLDDAVTIEEIDALARTPELDSRLLPLETGLT
DLPELRCTPEGATRLRNGNPGMVLGGDVEYGDEAWASFEGRPLAVGRFKAGELHPSRVFN
LD
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaaacgcaagggccgcgacatttccggctggctgatcgtcgacaagcccgcg
ggaatgacctcgaccgcggtggtcaacaaggtccgctgggcgctggaggcgaagaaggct
ggccatgccgggacactggacccggaagccaccgggctgctggccgtggccctgggcgag
gcgacgaagaccgttccctatatcaccgatgcgctcaaggcctatgccttcacggtgcgg
ctgggtcaggccaccaacacagacgacaccgaaggcgaggtcatctccacctccgacctg
cgccccaccgatgacgagatcaaggcggccctcggcaccttcgtcggagagatccagcag
gtgccgccgcagttctccgccgtgaagatggacggcgaacgcgcctataaacgcgcccgc
gacggcgaggacatggacctcgccgcccgcccgctctgggtagaggaactgcttctggcc
gaccgcccggacgccgataccgccatgctggaaatgacctgcggcaagggcggctacgtg
cgctcgatcgcccgcgatctcggcgccgccctgggctgccatggccacgtcctgaccctg
cgccgcctctggtccggccccttcgacctcgacgacgcggtgaccatagaagagatagac
gcccttgcccggacgccggagctcgacagccgcctcctgccgctggaaaccggcctcacc
gacctgccggaactgcgctgcacccccgagggcgcaacccgcctgaggaacggcaacccc
ggcatggtgctgggcggggacgtcgaatacggcgacgaggcctgggccagcttcgagggc
cgtcccctcgcggtgggccgtttcaaggccggcgagctgcaccccagccgcgtcttcaac
ctcgactga
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