Ponticoccus alexandrii: GQA70_19375
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Entry
GQA70_19375 CDS
T08196
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
palx
Ponticoccus alexandrii
Pathway
palx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
palx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GQA70_19375 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palx03021
]
GQA70_19375 (rho)
03019 Messenger RNA biogenesis [BR:
palx03019
]
GQA70_19375 (rho)
Transcription machinery [BR:
palx03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GQA70_19375 (rho)
Messenger RNA biogenesis [BR:
palx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GQA70_19375 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
AAA_22
NACHT
ATPase_2
OB_RNB
AAA
AAA_25
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QRF68283
UniProt:
A0ABX7FCI5
LinkDB
All DBs
Position
complement(4080733..4082004)
Genome browser
AA seq
423 aa
AA seq
DB search
MTEEKLNLADLKAQSPKDLLAMAEELEIENASTMRKGEMMFQILRERADEGWQIFGDGVL
EVLQDGFGFLRSPEANYLPGPDDIYVSPDMIRKHSLRTGDSIEGEIRAPDNEERYFALVA
VSKINFEDPERARHKIAFDNLTPLYPDERLKMEIEDPTIKDRSARIIDLVAPIGKGQRSL
IVAPPRTGKTVLLQNIANSIEKNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEP
AQRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRVF
PALDILKSGTRKEDLLVDKTDLQKTFVLRRILNPMGTTDAVEFLISKLKQTKTNSEFFDS
MNS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagaaaagctgaacctcgccgatctgaaggcgcagtctccgaaggatcttctg
gccatggccgaagagctggagatcgagaacgcctcgaccatgcgcaagggcgagatgatg
ttccagatcctgcgcgagcgggcggatgagggctggcaaatcttcggcgacggggtgctg
gaggtgcttcaggacggctttggcttcctgcgctcgcccgaggccaactacctgccgggc
cccgacgacatttatgtctcgccagacatgatccgtaagcactctctgcggaccggagac
agcatcgagggagagatccgcgcaccggacaacgaagagcgctatttcgccctggtcgcg
gtctcgaagatcaacttcgaggacccggagcgcgcgcgccacaagatcgccttcgacaac
ctgacgccgctgtaccccgacgaacgcctgaagatggagatcgaggatccaaccatcaag
gaccgctctgcgcgcatcatcgacctggtcgcgccaatcggcaaaggacagcgctcgctg
atcgtggcgccgccgcgcaccggtaagacggtgctcttgcagaacatcgccaactcgatc
gagaagaaccaccccgagtgttatctgatcgtcctgctgatcgacgaacgcccggaagaa
gtcaccgatatgcagcggtccgtgaagggtgaggttgtgtcttcgaccttcgacgaacca
gcacagcggcacgttgccgtgtccgagatggtcatcgagaaggccaagaggcttgtggaa
cacaagcgagatgtagtcatccttctggattccatcacaagacttggtagagccttcaat
actgtggtgccctcctccggcaaggttctgaccggcggtgtggatgcgaatgccctgcag
cggcccaagcgcttcttcggcgcggcgcgcaacatcgaggaaggcggctcgctgacgatc
attgccacggcactgatcgacacgggatcgcgcatggacgaggtgatcttcgaagagttc
aagggcaccggcaactccgagatcgtgctggaccggaaggtggcggacaaacgggtcttc
cccgctctggacatcctcaagtcgggcacccggaaagaggatcttctggtcgacaagacc
gatctgcaaaagacctttgtcctgcgccgtatcctgaacccgatgggcacgacggatgca
gtcgagttcctgatctcgaagctgaagcagaccaagacgaattcggaattcttcgactcc
atgaacagctga
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