Ponticoccus alexandrii: GQA70_20190
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Entry
GQA70_20190 CDS
T08196
Name
(GenBank) TIM barrel protein
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
palx
Ponticoccus alexandrii
Pathway
palx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
palx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GQA70_20190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palx03400
]
GQA70_20190
Enzymes [BR:
palx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
GQA70_20190
DNA repair and recombination proteins [BR:
palx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GQA70_20190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QRF68707
LinkDB
All DBs
Position
p-SCP2:10702..11541
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AA seq
279 aa
AA seq
DB search
MTNPASNFAVNLYAYTFKWTAADAMRHLAGKGFAGFELMMYPGHLWPSEVDTAARRDIVK
VAEDTKTRIVSFNMPNLDLNIAGGSEEVRTYSLDLIEGFLNLAGDVGAPKIVLGPGKANP
LFPLPDEVLRGHFFRALDRLLPVAKENGVKVLIENMPFGWLPDARSLLSTVEEYGDDDVG
IIYDVTNAYFISEDPCDGLRHLQHRLDLVHFSDTGRKAYRHDPVGAGDMDFAIYPPVLEE
IGYSELPVLEVVSREAQIDTEILESAATLSELGFKAKAA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatcccgcctcgaattttgccgtgaacctctatgcctataccttcaagtggacc
gccgccgatgcgatgcgccaccttgcaggcaagggctttgccgggttcgaactgatgatg
tatcccggccacctctggcccagcgaagtcgataccgccgcccggcgtgacatcgtcaag
gtggccgaagacacaaagacccgcatcgtgtcgttcaacatgccgaacctcgatctcaac
atcgcgggcggttccgaagaagtgcgtacctacagcctcgatctgatcgaaggcttcctg
aacctcgcgggcgacgtcggcgcacccaagatcgttctgggaccgggcaaggccaacccc
ttgttcccgctgcccgacgaggtgttgcgcggacatttctttcgggcgctggacaggctg
cttccggtcgcgaaagagaacggagtgaaggtcctgatcgaaaacatgcccttcggctgg
ctgcccgatgcgcgctctctgctgtccacggtggaggagtatggcgatgacgatgtcggc
atcatctacgatgtgaccaacgcctacttcatcagcgaagatccttgcgacggtctgcgg
caccttcagcaccgtctggacctggtgcatttctcggacacggggcgcaaggcctatcgc
catgatccggtcggggccggggacatggatttcgcgatctatccgccggtcttggaagag
atcggctattccgagctgccggtgctcgaagtcgtctcgcgcgaagcgcagatcgacaca
gagatccttgaaagcgcggcgaccctgtccgagcttggcttcaaggcaaaggcggcctga
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