Ponticoccus alexandrii: GQA70_22645
Help
Entry
GQA70_22645 CDS
T08196
Name
(GenBank) RNA polymerase subunit sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
palx
Ponticoccus alexandrii
Pathway
palx02020
Two-component system
palx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
palx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GQA70_22645
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GQA70_22645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palx03021
]
GQA70_22645
Transcription machinery [BR:
palx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GQA70_22645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
HTH_23
HTH_Crp_2
Sigma54_AID
HTH_IclR
MarR_2
HTH_36
HTH_3
HTH_31
MarR
LacI
Motif
Other DBs
NCBI-ProteinID:
QRF69148
LinkDB
All DBs
Position
p-SCP4:261854..263113
Genome browser
AA seq
419 aa
AA seq
DB search
MSLSTRMRINQAHAFRMGHVTGVLQMSGEELDEHLLQTARDNPFLVVRQRRRGAIRAGGL
ADLMETLVADKPTGLYDHAMRELAGLMARDARMERLILGLIEELEPTGWIGRSVPEIAEK
LGLGCDLVDMALTLVQKRISPTGLFARNLAECLRLQLEEQEALDSDTEAVLAHLHLLERG
GPAALAQVAGLEDAMVARQLSRLRRLDPKPGTQFATDLTLTREPDVRIEPEGAGWRINFR
SGTEATMAVLPKTAEVGAAEWRQAHSEARALKQALDLRQSALRKIVDVMVEVQGDFFRDG
PEALQALTQTTIAERTGFHLSTVSRVLNGLLIEGPNGIVSAQALCPRSARRSGEDGAPKP
KVMARLHSLLKTECTVHPLSDQRLSERLGAEGLAVSRRVVAKYRQELGFARATERRLGA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtcgacccggatgcgtatcaaccaggctcacgcgttccggatggggcatgtg
accggtgtgttgcaaatgtccggcgaggagctggacgaacacctgctgcaaacggcccgc
gacaacccgtttctggtggtgcgccagcgccgacgcggcgcgatacgcgcaggtgggctc
gcggatctgatggagactctggtcgcggacaaaccgactggcctctacgatcacgccatg
cgcgaactggcggggctgatggcgcgcgacgcgcgcatggaacggcttatcttgggtttg
atcgaagaactcgaaccgaccggctggatcggccgatcggtgcccgaaatcgccgaaaag
ctggggctgggatgcgatcttgtcgacatggcgctgacgctggttcagaaacggatctct
cccaccggcttgttcgcacgcaaccttgccgaatgcctgcgcctccagcttgaagagcag
gaggcgctggacagcgacaccgaggcggttctcgcacatctgcacctgctcgaacgcggc
ggcccggcggctctggcgcaggtggccggactggaggacgcgatggtggccaggcagctg
tcgcgcctgcggcgtcttgatccgaaaccggggacccagtttgccacggacctgacgctg
acgcgcgaaccggacgtgcggatagagcccgagggagcaggctggcgcattaacttccgc
tcgggcaccgaggccacgatggcggtgctgccaaaaacggcagaagtcggcgcggcggaa
tggcgacaggcgcattccgaggcgcgcgccctcaaacaggcgctggatctgcgccaaagc
gcgcttcggaagatcgtcgatgtcatggtcgaggtgcagggcgatttctttcgcgatgga
ccggaggcgctgcaggcgcttacccagaccacgatcgcagagcggaccggcttccacctg
agcacggtcagccgggttctcaacgggttgctgatcgagggaccgaacgggatcgtttcg
gcgcaggccctctgtccccgcagcgccagacgcagcggcgaggacggcgcgcccaagccg
aaggtgatggcccgtctgcacagccttctgaagacggaatgcaccgtccatccgctctct
gatcagcgtctgtccgaacggcttggcgccgaggggcttgcggtctcgcggcgggtggtc
gcgaaataccgccaggagctgggctttgcccgggcgacggaacggcgactgggcgcctga
DBGET
integrated database retrieval system
