Ponticoccus alexandrii: GQA70_22940
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Entry
GQA70_22940 CDS
T08196
Name
(GenBank) GAF domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
palx
Ponticoccus alexandrii
Brite
KEGG Orthology (KO) [BR:
palx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palx03000
]
GQA70_22940
Transcription factors [BR:
palx03000
]
Prokaryotic type
Helix-turn-helix
Other families
GQA70_22940
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
AAA_lid_14
Sigma54_activ_2
HTH_8
HTH_30
AAA_16
HTH_23
AAA_22
HTH_1
HTH_AsnC-type
Zeta_toxin
Lipase_GDSL_2
AAA
HTH_50
HTH_28
HTH_24
AAA_5
NACHT
HTH_psq
Motif
Other DBs
NCBI-ProteinID:
QRF69199
UniProt:
A0ABX7FFG1
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Position
p-SCP4:complement(322210..323958)
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AA seq
582 aa
AA seq
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MVERHHVEEIAEVLEGRASGRDSYVDASWRRCVELYGMDPTRSDPAHIVTETEFRIHRDQ
ADWMIGAARSSLQGLFRQVTGQNYVLLLTDAKGVCVDFYGDDLLVDELRKAGLYLGSNWS
EDLAGTCGVGACIVTGEPVTVHQDDHFGNAHTGLSCTSAPIYDSLGQLAAVLDISLLRSP
APKSSQNLAMSLVTAAARRVEMANLMAASRREWVLRFSTSPEFLDVDPEAAVSLDGAGRV
IGATRAATRMLSGGKSLIGARIDTLLGLSVDDLPDLMRDRPTEDRVVALGDGGAVFGHAI
APQAPRRAPGQPIAPALRVRGGVLATLAGGDPAMARLLSQAERLAPTPVPLMLCGESGTG
KTKLARAVHMASRRGGFVALDCAGADVEDLGAALSGQTGPGTLLLRRVEDLAPETARVLA
GLLDAHPDMRPIATTGRVASELMAQGTLPPMLYHRLAGAVLALPPLRERQDLGWLIDRLL
RRRDGGEMRLTPSARAELMARDWPGNLRALGNTLDVACALAETKVIDLPDLPAAPRSPAP
EQDLEAVLDACNWNMARAARRLGVNRSTVLRRIRREGLRAPD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggtcgagcggcatcacgtcgaggaaatcgccgaggttctggaggggcgcgcgtccggg
cgggacagctacgtggatgcctcttggcggcgctgcgtcgagctgtacgggatggacccg
acgcgcagcgatccggcccatatcgttaccgagaccgagttccgtattcaccgtgatcag
gccgactggatgatcggggccgcgcgctccagcctgcagggcctgttccggcaggtgacg
ggccagaactacgtgctgctcctgaccgatgccaagggcgtctgcgtcgacttctacggc
gacgacctgctggtggacgagttgcgcaaggcggggctctacctcggctccaactggtcc
gaagatcttgcgggaacctgtggtgtcggtgcctgcatcgtgaccggcgagccggtaacc
gtgcatcaggacgatcacttcgggaacgcgcatacagggttgtcctgcacctcggcgccg
atctacgacagccttgggcaactggcggcggttctggacatctcgcttttgcgctctcct
gcgccgaagagcagccagaacctcgccatgtcgctggtgacggcggcggcgcggcgggtc
gagatggcgaacctgatggcggccagccgccgggaatgggtgctgcgattctcgaccagc
cccgagttcctcgacgtagaccccgaggcggcggtgtcgctggacggcgcgggtcgcgtg
atcggcgctacgcgtgcggcgacgcggatgctgtcgggtggcaagagcctgatcggcgcg
cggatcgacacccttctggggttgagcgtcgacgacctgcccgacctgatgcgcgatcgc
ccgaccgaggaccgggtggtggcgcttggcgatggcggtgccgttttcggccacgcgatt
gcgccgcaagcgccccgccgggcaccgggtcagccgatcgcgccagccctgcgggtgcgc
ggcggtgttctggccaccctcgctgggggggatccggccatggcccggctgctgtcgcag
gccgagcggctggccccgacgccggtgcccctgatgctgtgcggcgaaagcggaaccggc
aagaccaagctggcgcgcgcggtgcacatggcctcgcggcgcggtggtttcgtggccctc
gattgtgccggggccgatgtcgaggatctgggcgccgcgctctctggccagacgggcccc
ggcacgctgctgctgcgccgggtcgaggatctggcgcccgagactgcgcgcgtccttgcg
gggcttctggatgcccaccccgacatgcgcccgattgcgacgacagggcgggtcgcgtcc
gaactgatggcgcaggggacattgcccccgatgctgtatcacaggctggccggggcggtg
ctcgccctcccgcctctgcgcgaaaggcaggaccttggctggctgatcgaccggctgctt
cggcgccgcgacggcggcgagatgcggctgaccccctcggcgcgggccgagctgatggcg
cgtgactggccgggtaacctgcgggcgctcggcaatacgctggacgtggcctgcgctttg
gcggaaaccaaggtgatcgacctgccggacctgcccgccgcgccccgttccccggcgcca
gagcaggatctggaggcggttctggacgcctgcaactggaacatggcccgggccgcgcgc
cgccttggggtcaaccgatcgaccgttctgcgtcgcatccgcagggaggggttgcgcgcg
cccgactga
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