Populus alba (white poplar): 118027496
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Entry
118027496 CDS
T07314
Name
(RefSeq) F-box protein SKP2A isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
palz
Populus alba (white poplar)
Pathway
palz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118027496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118027496
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118027496
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_Zer-1
LRR_8
F-box_4
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
118027496
NCBI-ProteinID:
XP_034886795
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Position
14:complement(13047490..13050517)
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AA seq
377 aa
AA seq
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MAGEVKGRREDLNLYSEKPMMLAFDGGKSGIGAGGVEIEGLVITEWKDIPMELLLRIVSL
VDDRTLIMASGVCSGWRDAICSGLTHLCLSWCKNNMNNLVLSLAPKFTKLQTLVLRQDKP
QLEDNAVETIVSYCHDLQDLDLSKSFKLSDLSLYALAHGSPNLTKLNISGCTAFSDVSLE
YLTEFCRKLKFLNLCGCVNGATDRALQAIGRNCSQLQSLNLGWCENVGDVGVMSLAYGCP
DLRTLDLCGCVCITDDSVIALANRCPRLRSLCLYYCRNITDRAMYSLVHNRVKNKPATWE
SRKGRYDEEGLKSLNISQCTAITPPAVQALCDSFPALHTCSGRHSLVMSGCWNLTSVHCA
CAVQAHHTASSIPHPAH
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggaagtaaaagggaggagggaagacttgaatttgtattctgagaagccgatg
atgcttgcttttgatggtggaaagagtgggattggtgcaggaggtgtggaaatcgaaggc
ttggtgatcactgagtggaaagatatccctatggagctgttgttaaggattgtttctctt
gttgatgataggaccttgattatggcttccggggtttgcagtggatggagggatgctatt
tgctcgggactcacccatctgtgtctctcttggtgcaaaaacaacatgaacaacttggtt
ctatctcttgctcctaaatttacaaaactgcaaactcttgtgctgcgccaagataaacca
caactcgaggacaatgctgttgagactattgtaagttactgtcatgatctgcaggacctg
gatctcagcaaaagctttaagcttagtgatctctccttgtatgcattagctcacggttct
cccaatcttaccaaactcaacatcagtggttgtacggcattcagtgatgtttctctagag
tatctgacagaattttgccgaaaattaaaatttttaaatctctgtggatgtgtgaatggt
gcaactgaccgtgccttgcaggctattggacgcaactgcagtcagttgcaatctttgaat
ctgggatggtgtgagaatgtgggtgatgtcggagtaatgagtctagcatacgggtgtcct
gatctcagaacccttgacttgtgtggttgtgtctgtataacagatgatagcgtgattgct
ttggcaaacaggtgtccccgtcttagatccctctgtctgtactactgccggaacatcaca
gatagagcaatgtattcccttgtccacaaccgagtgaagaacaagcctgcaacgtgggaa
tcaaggaaaggcaggtatgatgaggaaggattaaagagtctcaacatcagtcagtgcacg
gcaatcacacctcctgctgttcaggctctatgtgactcgttccctgcacttcatacctgc
tcagggaggcattccctcgttatgagtggctgttggaacttaacttccgtgcattgtgcc
tgtgctgtccaagcacaccacaccgcaagttctattcctcatccggcacattga
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