Populus alba (white poplar): 118028039
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Entry
118028039 CDS
T07314
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118028039
04121 Ubiquitin system [BR:
palz04121
]
118028039
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118028039
Membrane trafficking [BR:
palz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
118028039
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118028039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
Zn_ribbon_FGT1_2
zf-RING-like
zf-RING_16
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
118028039
NCBI-ProteinID:
XP_034887446
LinkDB
All DBs
Position
1:complement(28860104..28861565)
Genome browser
AA seq
363 aa
AA seq
DB search
MASTTATSYWCYRCARFVTVSPRNEDEEQNHASYITCPHCDGGFVEEIQSNYDNRRNRSR
VSNFIRNRRSDGDRSPYNPVIVLRGTSPAAADDNDEGSAYEFYYDDGTGSGLRPVPETMS
EFLMVSGFDRLLDQLSQIEINSLGRSAPNPPASKAVVESMPRVEINETHVVSETYCAVCK
EAFEIGDEAREMPCKHIYHSDCILPWLAMRNSCPVCRHELPVDNSEEEEAEGEVVGLTIW
RLPGGGFAVGRFSGGRRGGEREFPGVFTEMDGGGNGGLSGNRRPRDWDSWVTRSRGREGS
SGSGGFRRVFRGLGSFLRRIRPNSSSRMHDVSGTESIERSYSSHVTRRRRGLDLEVEEGA
DRW
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacgacggccacgtcgtattggtgttacagatgtgcacgcttcgtcaccgtt
tcacctcgcaacgaagacgaagaacaaaaccacgccagctacatcacgtgtcctcactgc
gacggtgggtttgtggaagagatccaatccaactacgacaaccgtcgaaaccgtagtcgg
gtttccaacttcatccgaaaccgccgcagcgatggcgaccggtctccgtacaaccccgtg
atcgtcctccgcggaacaagccccgccgccgccgatgacaacgatgaaggaagcgcctac
gagttctactacgacgatggaactgggtcgggtctccgacccgtacctgagaccatgtcg
gagtttttaatggtttctggttttgatcgcttactggaccaattatcacagattgagata
aacagcttaggccggtcggcccctaacccgccggcgtcgaaagccgtggttgaatcaatg
cctcgcgtagaaataaacgaaacgcacgtggtttcggagacgtactgtgcagtgtgtaaa
gaggcatttgagattggagacgaagctcgcgagatgccttgcaagcatatttaccactct
gattgcatcttgccctggcttgcgatgcgaaattcttgtccggtttgtaggcacgagttg
cctgtggataattctgaagaggaggaggcggaaggggaggttgtggggttgactatatgg
aggttgcctggaggcgggtttgctgttgggaggtttagtggggggaggagaggtggagag
agggagtttccgggtgtttttacggagatggatggcggtgggaatggtgggcttagtggg
aacaggaggcctcgagattgggattcttgggtaactaggagtagaggaagggagggtagt
agtggcagtgggggttttaggagagtttttcgtggtttgggttcgtttttgaggaggatt
aggcctaattcgtcttcaagaatgcatgatgtatctggaactgaatcaattgagagaagt
tattcgagtcatgtaacaaggaggagaagaggattggatttggaagttgaggagggggct
gataggtggtga
DBGET
integrated database retrieval system
