Populus alba (white poplar): 118028056
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Entry
118028056 CDS
T07314
Name
(RefSeq) U-box domain-containing protein 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Pathway
palz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
118028056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118028056
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118028056
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
U-box type E3
118028056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
MLKL_N
HEAT_2
Arm_2
Neurochondrin
zf-RING_UBOX
zf-C3HC4_4
zf-Nse
KAP
zf-C3HC4_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
118028056
NCBI-ProteinID:
XP_034887469
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All DBs
Position
1:complement(28382926..28387417)
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AA seq
665 aa
AA seq
DB search
MEEEEKGGGEVVEILIETVNKIASISDYRCTVKKQYCNLARRLKLLIPMLEEIRDSKDSI
IPQQTLKALVLLKQALDSAKDLLIFGCEGSKIYLVLEREQIMNKYHEVTAKLEQALTGIS
YEGLDISDEVKEQVELVLAQFRRAKGRVDATDVELYEDLLSLYNKTNDSASDLAVLRRIS
EKLQLMGIADLTQESLALHEMVGATGGDPGESIEKMSMLLKKIKDFVQTENPNLDAPERE
KNLPPSGSGQAIVDGSRQMPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLGAGH
DTCPKTQQKLTSTALTPNYVLRSLIAQWCEANGIEPPKRPSSSGTSKTVSTCSPAELTKI
KILLQKLKSGCVEDQRSAAGEIRLLAKHNADNRVAIAQAGAIPLLVGLLSTPDPCIQEHA
ITALLNLSICEDNKGNIVSAGAVPGIVHVLKKGSMEARENAAATLFSLSVVDENKVTIGF
LGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMCLLTETGGGMV
DEALAILAILASHPEGKATIGAAEAVPVLVEVIRNGSPRNRENAAAVLVHLCSGDQKHMV
EAQEHGVMGPLVDLAQNGTDRGKRKAQQLLERISRFVEQQNHSQAQTEAHIQQPQPSSMA
NFGDS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaagagaaaggaggaggtgaggtagtagagattttgattgagacagtgaac
aagattgcttcgatctcagattacagatgtacggtcaagaaacagtattgcaatctagcc
aggaggttgaagttgttgataccaatgttggaagagattagagacagcaaagactccatc
atccctcaacaaactctcaaagctcttgttttgctcaaacaagctttggattccgctaaa
gatttgcttatatttggttgcgaaggaagcaagatttacttggtcctagagagggaacaa
attatgaataaataccatgaggtgacagctaaattggagcaagctctaactggaatttcc
tatgaaggcctggacatatctgatgaagttaaggaacaggttgagcttgtccttgctcaa
tttagaagagccaaaggaagggtcgatgctactgatgttgagctgtatgaagatctcttg
tccctttacaacaagaccaatgattcagcatcagatcttgctgtcctaagaagaatatct
gaaaaattacaattgatgggaatagctgaccttacacaagagtctctagctttgcatgag
atggttggtgctactggaggagatcctggggagagcattgagaagatgtcgatgctattg
aagaaaattaaagattttgtgcaaacagaaaatccaaacctggatgcacctgaaagagaa
aagaatcttcccccaagtggcagtggacaagctattgttgatggaagtcgccagatgcca
gttataccagatgatttccgctgtccaatatccctggaattgatgaaggatcctgtaatt
gtttcaacagggcagacctatgaacgttcctgcattgagaaatggctgggagcaggacat
gacacttgtccaaagacgcaacagaaactcactagtactgctctgacacccaactacgtt
ctacgaagcctcatagcacagtggtgtgaagccaatggcattgagccaccaaaaaggccc
agcagttctggaacaagtaaaactgtatctacttgctcacctgctgagcttacaaagatt
aaaattctcctccagaagcttaaatctggctgtgtagaagaccagcggtctgctgccggg
gagatccgtcttcttgccaagcacaacgctgataatcgtgtggctattgctcaagctggt
gcaatccctcttcttgttggcctcctctcgacacctgacccttgcatccaagagcatgca
attacagcgcttcttaacctctccatatgcgaagataacaaaggaaacattgtatcagct
ggggcagttcctggtattgtgcatgtgctcaagaagggcagcatggaagctcgagaaaat
gctgcagccacccttttcagcctttcagttgtggatgaaaataaggttacaattggtttt
ctgggggctatcccacctctggtgacacttctaagtgaaggtacacaaagggggaagaag
gatgcagcgactgcacttttcaacttgtgcatctaccaggggaacaagggaaaggcagtg
agggctggagttgtgcccacattgatgtgtctattaacagaaacgggaggtggaatggtg
gatgaggcactggctatactagcaatactggctagccaccctgaagggaaggcaaccatt
ggagctgcagaggcagtgccagttttggtggaagttatcaggaatgggtcacccaggaac
agagagaatgcagcagcagtgctggtgcatctttgttctggagaccagaaacatatggta
gaggcacaagaacatggagttatgggaccgctggtggatttggcacaaaatggcacagac
cggggaaagaggaaggctcaacagttgcttgagcgtataagcagatttgttgagcaacaa
aatcactctcaggcacaaactgaggctcatatccagcagcctcagccatcctccatggct
aattttggtgatagttga
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