Populus alba (white poplar): 118028305
Help
Entry
118028305 CDS
T07314
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
palz
Populus alba (white poplar)
Pathway
palz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118028305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118028305
03110 Chaperones and folding catalysts [BR:
palz03110
]
118028305
03029 Mitochondrial biogenesis [BR:
palz03029
]
118028305
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
palz04147
]
118028305
Enzymes [BR:
palz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
118028305
Messenger RNA biogenesis [BR:
palz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
118028305
Chaperones and folding catalysts [BR:
palz03110
]
Heat shock proteins
HSP60 / Chaperonin
118028305
Mitochondrial biogenesis [BR:
palz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
118028305
Exosome [BR:
palz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118028305
Exosomal proteins of other body fluids (saliva and urine)
118028305
Exosomal proteins of breast cancer cells
118028305
Exosomal proteins of colorectal cancer cells
118028305
Exosomal proteins of bladder cancer cells
118028305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
118028305
NCBI-ProteinID:
XP_034887744
LinkDB
All DBs
Position
15:2258086..2262671
Genome browser
AA seq
585 aa
AA seq
DB search
MSFSFSISEPLAFPQQPLFSSLGGNKRASGIWRNHQVVNKLVVRAGPKKISFGKDCREAL
QAGIDKLADAVSLTLGPKGRNVVLSDSKTLKVVNDGVTIARAIELPDSMENIGAILIQEV
ASKMNDMAGDGTTTAIILAREMIKTGMLAVTFGANPVFVKKGMDMAVKELVKVLKKNSFP
VKGKDDIKAVASISAGNDEFVGNLIAETIEKIGSDGVISLESSSTSDTFVIIEEGMKFDK
GYMSPQFITNQEKSLVEFDKAKVLVTDQKIANVQEIVPVLEKTTQLSVPLLIIAEDISKP
VLETLVVNKMKGLLNVAVVKCPGFGDRKKALLQDIALMTGADFLSGDFGLTLGSVTSDQL
GIARKVTITSNSTTIVADSATKAEIQARILQIKKDLAETDNAALSRKLSERIAKLSGGVA
VIKVGAHTETELVDRKLRIEDAKNATFAAMDEGIVPGGGAAYVHLSEQISSIKNSMKDEN
EKIGADIVAKALLAPAKTIATNAGVDGAVVVENIRSCDWRTGYNAMTGRYEDLLNAGVVD
PCRVSRCALQSAVSIAGIVLTTQAVLVEKIKKPKPAVPYVPGITP
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctccttctctatctccgaaccgcttgcctttcctcaacaacccctattctct
agtctaggtgggaacaaaagggcaagtgggatatggagaaaccatcaagtagtgaataag
ttagtggtaagagcaggtccaaagaagatatcttttggtaaagattgtagagaagccttg
caggcaggaattgataagcttgctgatgctgtttctctcactttaggacctaaagggcgt
aatgttgttctttcggattcaaagacgctaaaagtagtaaatgatggtgttacaatagct
cgtgctatagagcttccggattcaatggagaatattggagcaattttaatccaagaggtt
gctagtaaaatgaatgatatggctggagatggcactactactgctattattttggctcgt
gaaatgatcaaaacagggatgttggcagtcacttttggggctaaccctgtttttgtaaag
aaaggaatggatatggctgtcaaagagttggtcaaagtgttgaagaagaatagttttcct
gtaaaagggaaggatgatataaaagcggtcgcttcaatttctgctggaaatgatgaattt
gttgggaacttaattgctgaaactatagagaagattggctctgatggagtaatctctctt
gaatcatcttcaacctctgatacatttgtgataatagaagaaggaatgaagtttgacaag
ggttatatgtcaccccaattcatcacaaaccaggaaaaatctttggtggagtttgacaag
gccaaagtccttgtaacggatcagaagattgcaaatgtccaagaaatagttcctgtgttg
gagaagactacccaactcagtgtcccattgttaatcattgctgaggatatctcaaagccg
gttttggaaacactagtggtgaacaaaatgaaaggtttgctcaatgttgctgttgtcaaa
tgccctggatttggagatcgaaagaaagcattgttgcaagacattgctcttatgacaggt
gctgattttctctctggtgattttgggctgacactcggaagtgtaacctcggatcaactt
ggcattgcacgaaaagttaccataacaagtaattcaacaaccatagttgctgactcagct
accaaagctgaaattcaggcaagaattctgcagataaaaaaggaccttgctgaaacagat
aatgctgccctttcaagaaagctctcagagagaattgctaaattatctggtggtgtggct
gtaatcaaggtaggagcacacacggagacagaacttgtagataggaaactcagaattgaa
gatgcaaagaatgctacatttgctgccatggatgaagggatagtacctggtggtggtgca
gcatatgtacatctctcagagcagatctcctcaataaaaaattccatgaaagatgaaaat
gagaagattggtgctgatattgttgcaaaggcacttctcgcacccgcaaaaacaattgca
actaatgcaggggttgatggagcagttgtggtggagaatattcgatcttgtgactggaga
actggttacaatgcaatgactggtagatatgaagatcttctcaatgcaggggtggtagat
ccttgtagagtttctcggtgtgcacttcaaagtgctgtctcaattgctgggatagttcta
acaactcaagctgtgctggttgaaaaaataaagaagcccaagcccgctgtcccttatgtt
cctggaattacaccttga
DBGET
integrated database retrieval system
