Populus alba (white poplar): 118028650
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Entry
118028650 CDS
T07314
Name
(RefSeq) cleavage stimulation factor subunit 77 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
palz
Populus alba (white poplar)
Pathway
palz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118028650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118028650
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
118028650
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Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_19
PRP6_TPR
HAT_Syf1_CNRKL1_C
TPR_16
TPR_15
TPR_2
CFAP70_mid_TPR
TPR_CcmH_CycH
TPR_YpiA
NRDE-2
Motif
Other DBs
NCBI-GeneID:
118028650
NCBI-ProteinID:
XP_034888225
LinkDB
All DBs
Position
3:13925105..13938056
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AA seq
768 aa
AA seq
DB search
MASVDNGAQSETKDQATTSTTAATDPYNVEAAEILASSAQRMPIAQAAPIYEQILSLFPT
ASKFWKQYAEAHMAVNNDDAIKQIFSRCLLNCLHVPLWRCYIRFIKKVNEKKGADGQDEI
RKAFDFMLGYVGADMASGPVWMEYITFLKSLPAQNAQEESIRMTAIRKTYQKAIITPTHH
VEQLWREYENFENSVSRQLAKGLLSEYQPKYNSARAVYREQKKYVDEIDYNMLAVPPTGS
FKEEQQWMAWKRFLTFEKGNPQRIDSVSSNKRIIFTYEQCLMYLYHYQDVWYDYATWHAK
SGSIDSAIKVFQRALKALPDSDTLKYAYAELEESRGAIQPARKIYESLLGDGVNATALAH
IQFIRFLRRNEGVEAARKYFLDARKSPDCSYHVYVAYALIAFCLDKDSKIAHNIFEAGLK
RFMHEPVYILEYADFLSRLNDERNIRALFERALSSLPPEESVEVWKRYIQFEQTYGDLAS
MLKVEQRRKESLSRTGEDGASALESSLQDVVSRYSFMDLWPCSSKDLDHLARQEWLAKNI
NKKAEKSAVSNGPANLDKIPADLASNSNVSGKVIYPDTSQTVIYDPRQKLEAGIPPSTTA
SGFKAASNPLSNPIGLAPNVFDEVLKATPPALISFLANLPIVEGPAPNVDIVLSICLQSD
IPVGKAGKSGTAQNPMLSGPATSDLSGSSRSRPVPSGSSFKTRDRHSGKRKDRDRQEEDE
TATVQSQPLPRDVFRIRQIQKSRAATTSQTGSVSYGSALSGDLSGSTA
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgtcgataatggagctcaatctgaaacaaaggatcaagcaacaacaagtact
actgccgcgactgatccatacaatgtcgaagctgcagaaatattagctagcagcgcacag
cgtatgccgattgcccaagctgcaccgatatatgagcaaatcctttcactgtttcccact
gcttcaaaattttggaaacaatatgcggaggcacatatggctgtgaataatgatgatgct
ataaaacagatatttagccggtgtttattgaattgtcttcatgttcctctttggcgatgc
tacattcgatttatcaaaaaggtcaatgagaagaagggtgcagacggccaggatgaaata
agaaaagcttttgacttcatgcttggttatgttggggcagacatggcatctgggcctgta
tggatggaatacattacctttctgaagtcactaccagctcaaaatgcacaggaagagtca
atacggatgaccgctatacgtaaaacataccagaaagctattatcactcctactcatcat
gttgaacaactctggagagaatacgaaaattttgaaaattctgtcagccggcaattggcc
aaaggactgttatctgaatatcaaccaaaatataacagtgccagggctgtctatagggag
cagaagaaatatgttgatgaaattgattataatatgctagctgtaccaccaactggatct
ttcaaggaagaacaacaatggatggcttggaagagatttttgacgtttgagaaaggaaac
ccccaaaggatagacagcgtgtcctccaacaaacgaattatattcacctatgagcagtgt
ctgatgtatttgtatcattatcaagatgtatggtatgactatgctacctggcatgcaaaa
agtggctctatagattctgcaatcaaagtgtttcagagggctttgaaggcacttccagat
tcagatacactgaagtatgcttatgctgagttggaggaatctcgtggagcaatccagcct
gcaaggaaaatctatgaaagcctcttgggagatggtgttaatgcaacagcactagctcat
atacagtttattcgctttctaagaaggaatgaaggagtggaagcagctcgcaagtacttc
ttagatgctcggaaatccccagactgctcttatcatgtttatgttgcttatgctttgata
gcattttgtctggacaaggattcaaagatcgcgcacaatatttttgaagcaggattgaaa
cgcttcatgcatgaaccagtgtacattctggaatatgcagatttcttgtcccgtttgaat
gatgagagaaacattcgagctttatttgagcgtgcattaagctcgctaccacccgaggaa
tctgttgaggtctggaaacgatatatccagtttgagcaaacatatggtgatcttgccagc
atgttgaaggtcgagcaaagaagaaaagaatctctttcgaggacaggtgaagatggagca
tcagcattagagagttcattgcaggatgttgtgtcacggtatagtttcatggatctttgg
ccatgctcctctaaggatttggatcacttagctcggcaagagtggctagctaaaaatatt
aataagaaagcagagaagtctgctgtttctaatggacctgccaatttagataagattcct
gctgatctggcaagtaattcaaatgtatctggtaaagtaatttatccagatacctcacaa
acggtaatttatgacccaaggcaaaagctagaggctggaattccacctagcacaacagcg
tctgggttcaaggctgcttctaacccattgtcgaatcctattggattggcacccaatgta
tttgatgaggtgctgaaagcaacaccacctgcattgatatcttttttagcaaacttgccc
atagtggaaggtcctgcaccaaatgtagatattgtattatcaatttgtttgcagagtgac
atacctgttgggaaagcaggaaagtcagggacagcccaaaatccaatgctttctggtcct
gcgacaagtgatctttctggttcaagcagatcgcgtcccgtcccaagcggttcatctttc
aaaacacgggatagacattctgggaaacggaaggaccgagacaggcaagaagaagatgaa
acggctaccgtccaaagccaaccattacctagagatgttttcaggatacggcagattcaa
aaatcgcgagctgctaccacttcacagacggggtcagtatcgtacggaagtgctctttca
ggagatctgtctggtagtaccgcctga
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