Populus alba (white poplar): 118029082
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Entry
118029082 CDS
T07314
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
palz
Populus alba (white poplar)
Pathway
palz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118029082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
palz03009
]
118029082
Ribosome biogenesis [BR:
palz03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
118029082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_LRRK2
NBCH_WD40
Beta-prop_WDR75_2nd
PEP5_VPS11_N
RMC1_N
Beta-prop_DCAF12
VID27
Beta-prop_IP5PC_F
WDCP
Utp12
Cytochrom_D1
VPS8_N
Motif
Other DBs
NCBI-GeneID:
118029082
NCBI-ProteinID:
XP_073262281
LinkDB
All DBs
Position
18:15683249..15689472
Genome browser
AA seq
724 aa
AA seq
DB search
MLHEFKGWGSSVSCCVSSPALDVVAVGCADGKIHVHNIRYDEEVVTFSHSTRGAVTALSF
STDGQPLLASGGSSGVISIWNLEKRKLQSVVREAHDSSIISLHFLANEPVLMSSSADNSI
KMWVFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSREL
SQRHVSKRAKKLRVKEEELKLKPVIAFDSGMIFLRELFKCLNVDVSCSRICVLNDLSFIN
AIEEACTISACGNFAILGTAGGWIERFNLQSGISRGSYLDVSERGSHAHEGEVVGVACDS
TNTLMISAGYHGDVKFWDFKGRALKSRWEVGCSLVKIVYHRLNGLLATVADDLVIRLFDA
IALRMVRKFEGHTDRITDLCFSEDGKWLLSSSMDGALRIWDVILARQIDAVHVEVSVTAL
SFSPNVDVLATTHVDQNGVYLWVNQSMFSRGSRIDAYASGKEVVNAKLPSLIAVEGSNAE
NEDTDKSIVKHSVSKEASTFPAFSQQIPDLVTLSLLPKSQWQSLITLDIIKVRNKPIEPP
KKPEKTPFFLPSIPSLSGEILFKPSEPVDGDDSRPDETESDRRKLDIPPTQFLELLQSSS
EMKNFSAFTEYIKGLSPSNLDMELRMFQIIDDYQEELETRPEFISIEQLLDYLIHEISSR
NNFEFVQAVIRLFLKIHGETIRCNLKLQDKARKLLETQCSVWQRVDNLFQSARCMVTFLS
NSQF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatgagtttaaagggtggggttcgtcggtcagttgttgtgtgtcatcgccagca
ttggatgttgttgcggttggttgtgctgatgggaagattcatgtgcataatattcgatat
gatgaagaggtggttacgttttcgcattccacgcgcggtgctgtgactgcattgtctttc
agtacagatgggcagccacttttagcttcaggaggttcttctggtgttataagcatttgg
aatctggagaaaagaaaactacaatcagttgtaagagaggctcatgatagttcgataatt
tcattgcactttttggctaatgagcctgtgctgatgagttcatcagcagacaactctatt
aagatgtgggtttttgatacaactgatggcgatcctcgacttttacgctttagaagtgga
cacagtgctcctccactttgcataaggttctatgcaaatgggagacacattctatctgct
ggtcaggatcgtgcctttcgtcttttctctgtcatacaggaccaacaaagtagagagctc
tcccagcgtcatgtatccaaacgagccaagaaacttcgggtgaaggaggaagaactgaaa
ttgaagcctgtcattgcttttgacagtggtatgatctttctcagagagctcttcaaatgc
ttaaatgtagatgtttcttgttctaggatttgtgttctgaatgacttgtcatttattaat
gctatagaggaggcttgcaccattagtgcatgtggcaacttcgctatcctaggaacggcg
ggtggttggatagagcgattcaaccttcaatcaggaattagccgaggaagttacctggat
gtttcagagagaggaagtcatgcccatgagggggaggtggttggagttgcttgtgattcc
acaaataccctaatgataagtgcaggatatcacggagatgtaaagttttgggatttcaaa
ggacgtgcattaaaatcaagatgggaagttggttgttctctggttaagattgtttatcat
cgtcttaatggtctgttggcgactgtcgcagatgatttggttatccgtttatttgatgcc
attgcactgagaatggttcgtaaatttgaaggtcatactgatcgaattacagatttatgt
tttagcgaggatgggaaatggcttttgtcatccagtatggatggagctcttagaatttgg
gatgtcatcttagcaaggcaaatagatgcagttcatgttgaggtgtctgtcacagcattg
tctttttcaccaaatgtggatgtgctggcaactacccatgttgatcaaaacggggtctat
ttgtgggttaatcagtcaatgttctccagaggttcaaggattgatgcttatgctagtggg
aaagaagttgtgaatgcaaaattgccatctttaattgcagttgaaggttcaaatgctgag
aatgaggatactgacaagtccattgtgaaacactcagtatccaaagaagcttctactttt
ccagctttcagtcagcaaattccagatcttgttactctctccctgttgcctaaaagccaa
tggcagagtttgatcaccttagatattataaaggtacgcaataaaccaattgagcctcca
aagaagcccgagaagactcctttcttcctgccttcaattccatctctatctggagaaata
ttatttaagcccagtgagccagtggatggggatgatagtagacctgatgaaacggagagt
gataggagaaaacttgacattccaccaactcaatttttggaacttcttcagtcttcttca
gagatgaaaaatttttcagcattcactgaatatatcaaaggtctatctccttcaaatttg
gatatggaacttagaatgtttcagataatagatgattatcaggaagaacttgaaacgaga
cctgagtttatttcaatcgagcagctgctagactatttgattcatgagatatccagcaga
aacaattttgagtttgtacaggccgtcataagattatttttgaagattcatggcgaaaca
atcaggtgcaatctaaaattacaggacaaggcaaggaagcttttagagactcaatgttca
gtttggcagagagtagataacttgttccaaagtgctcgatgcatggtcactttccttagc
aattcacagttctaa
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