Populus alba (white poplar): 118029216
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Entry
118029216 CDS
T07314
Name
(RefSeq) partner of Y14 and mago isoform X1
KO
K14294
partner of Y14 and mago
Organism
palz
Populus alba (white poplar)
Pathway
palz03013
Nucleocytoplasmic transport
palz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118029216
03015 mRNA surveillance pathway
118029216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118029216
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118029216
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Gene cluster
GFIT
Motif
Pfam:
Mago-bind
bAvd
SURF6
Lebercilin
Allexi_40kDa
Lambda_CIII
Motif
Other DBs
NCBI-GeneID:
118029216
NCBI-ProteinID:
XP_034888936
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Position
3:complement(3131191..3136216)
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AA seq
214 aa
AA seq
DB search
MADLSKTLEEGERIVTPSRRPDGTLRKPIRIRAGYIPQDEVAVYQSKGALWRKETQTQEV
PPGYDPVVPTKPKTKSVKKNERKKEKRLQQAALEKGKNSEAMEDGNMEKGVLPAEDLGCA
SESFESLASQMNELAVSSNSSVGLADSSNMESQLQDIDKRIRALKKKIRLAEAQQQKTMS
QEMKPEQMEKMTKLEGWRQELQLLEGKKAEEASS
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttaagcaaaaccctagaagaaggggagagaattgtgactcccagcagacga
cctgacggtacccttagaaaacccattcggattcgggctggttatatcccccaagatgaa
gtcgctgtctaccaatccaaaggggccctgtggagaaaggaaacgcagactcaggaagtt
cccccgggttatgatcctgttgttcctacaaagccaaaaactaagtctgttaaaaagaat
gaaagaaagaaggaaaagcggcttcagcaggctgcacttgaaaagggaaaaaactctgaa
gccatggaagatgggaacatggaaaagggagtgctacctgctgaagatttaggctgtgca
tctgaatcttttgaatcattggcatctcagatgaatgagctagctgtttcttcaaattcc
tctgtaggcctggcagattcttcaaatatggaatctcagcttcaagatattgataagaga
attcgggctcttaaaaagaagattcgactagcagaagctcagcagcagaaaactatgtca
caggaaatgaagccagagcaaatggagaagatgacaaaattggaaggctggcgccaagag
cttcagctcttggagggtaaaaaagctgaagaggcatcgtcatga
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