Populus alba (white poplar): 118029303
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Entry
118029303 CDS
T07314
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00061
Fatty acid biosynthesis
palz00071
Fatty acid degradation
palz01100
Metabolic pathways
palz01212
Fatty acid metabolism
palz04146
Peroxisome
Module
palz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
118029303
00071 Fatty acid degradation
118029303
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
118029303
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
palz01004
]
118029303
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
palz04147
]
118029303
Enzymes [BR:
palz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
118029303
Lipid biosynthesis proteins [BR:
palz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
118029303
Exosome [BR:
palz04147
]
Exosomal proteins
Exosomal proteins of breast milk
118029303
Exosomal proteins of breast cancer cells
118029303
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
Cas_APE2256
AMP-binding_C
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
118029303
NCBI-ProteinID:
XP_034889053
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All DBs
Position
5:16926906..16933158
Genome browser
AA seq
697 aa
AA seq
DB search
MIPYIVAILVPLIITLLYQKTKNAKKRGVPVDVGGEPGYAIRNAQFPTLLETAWEGVSTL
AQLFEMACKKHEHKCLLGTRTLISKDTEVSAGGRSFEKLHLGEYEWLTYGQVFEKVCNFA
SGLAHLGLRSEERVAIFADTRAEWFISLQGCFRRNVSVVTIYASLGEEAVCYSLNETEVT
AVICGAKELKKLAEVSGQLETVKYIICMDDETPSSASSVAQSGRWRVVSVADVEKLGREN
PVDAALPLSEDVAVIMYTSGSTGLPKGVMMTHGNVLAVVSSVRTIVTGLDDKDVYLAYLP
LAHILEIAAENVVASAGSAIGYGTPMTLTDTSNKIKRGTKGDATVLRPTVMAAVPAILDR
VRDGVQKKVDAKGGLTKKLFDFAYARRISAINGSWFGARGIELLLWNFLVFRKVRAVLGG
RIRFLLSGGAPLSGDTQRFINICLGAPICQGYGLTETCAGGTFSEFDDPSVGRVGNPVPC
SYIKLIDWPEGGYLISNSPMPRGEIVIGGPNVTLGYFKNEAKTKEEYKVDERGMRWFYTG
DIGQFHADGCLEIIDRKKDIVKLQHGEYISLGKVEAALVVSPYVENIMLHADPFHSYCVA
LVVAAQPALEEWASKKGIAFTDFAELCEKEETIKELQASLLKAAKAARLEKLEIPTKIKL
LPDPWTPETGLVTAALKLKREAVRKAFFEELSKLYES
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgattccgtatatagttgctatcctggttccccttataattactcttctctatcaaaaa
acaaagaatgcaaagaaacgtggggtgcctgttgatgtcggtggggaaccgggatatgcg
attcggaacgctcaatttccaaccctcttggaaactgcatgggaaggtgtttcaactctt
gctcaactttttgagatggcgtgcaagaaacatgaacataaatgcttgctcggaacgagg
acattaatctcaaaggacactgaagtttctgccggtggaaggtcttttgagaagcttcat
ttgggagagtatgagtggctgacctatgggcaagtgtttgaaaaagtgtgcaattttgct
tctggcttagctcacctagggcttagaagtgaggaacgtgttgcgatatttgctgacaca
agagcagagtggtttatttccttgcagggttgttttaggcgcaatgtctctgtggttacc
atctacgcatctttgggcgaggaagcagtttgctattcattaaacgagacagaagttaca
gctgtgatttgtggggccaaagaactgaaaaagcttgcagaagtaagcggacagcttgaa
acagtaaaatacatcatatgtatggatgatgaaactccatcaagtgcatcatctgtggcg
cagagtggtcgctggagagttgtgtcagtagctgatgtggagaaacttggacgagaaaat
ccagttgatgctgctttacctctatcagaagatgttgcagttataatgtacacaagtggg
agtactgggctgcctaagggtgtaatgatgacacatggtaatgtcctagctgtagtttct
tctgtcaggacaattgttactggccttgacgacaaggatgtttatctggcttacctacca
ttggctcatatccttgaaatagcggctgagaatgtagttgcaagtgctggaagtgctata
ggatatggaaccccaatgacactcactgatacatcaaacaagatcaaaaggggaacaaag
ggggatgcgactgtcttaaggccaactgtaatggcagctgttccagcaattcttgatcgt
gtccgagatggtgtgcagaagaaggttgatgcaaagggtggccttaccaagaaattgttt
gattttgcatatgctcgtcgaatatctgcaattaatggtagttggtttggcgctaggggc
atagaattgcttctgtggaacttcctggtgtttagaaaggttcgggcagttttgggaggt
cgcatccgctttttgctttctggtggtgctcctctttctggtgatactcaaagatttatc
aacatttgccttggggctccaatatgccaaggttatggtctcacagagacttgtgctggt
gggacattttctgagtttgacgatccatctgttggtcgagttggtaatccagtcccttgc
tcgtatattaagttaatagattggcctgaaggtgggtatttaattagcaattcaccaatg
cctcgtggggaaatagttattggtggtccaaatgttacgttgggatactttaaaaatgaa
gcaaaaacaaaagaggagtacaaggttgatgagagaggaatgaggtggttttatacaggt
gatataggacaatttcacgctgatggttgccttgagataattgaccgtaaaaaggatata
gtcaagcttcaacatggggaatatatctccttaggaaaggttgaggctgcacttgtcgtg
agcccctatgttgagaatataatgctgcatgcagatccatttcatagttactgtgtagcc
cttgtagtggcggcgcaacctgctctagaagaatgggcttcaaagaagggaattgcattt
actgattttgcagagttgtgtgagaaagaagaaacaataaaagaactgcaggcatcactt
ttgaaggcagcaaaggcagcacgattggagaagcttgagatcccaacaaagatcaaattg
cttcctgatccatggactcctgaaactggcctagtcactgcagctctcaagcttaagaga
gaggccgttaggaaggctttctttgaagaactctcgaagttatatgaatcttga
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