Populus alba (white poplar): 118029312
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Entry
118029312 CDS
T07314
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
palz
Populus alba (white poplar)
Pathway
palz03030
DNA replication
palz03410
Base excision repair
palz03420
Nucleotide excision repair
palz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118029312
03410 Base excision repair
118029312
03420 Nucleotide excision repair
118029312
03430 Mismatch repair
118029312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palz03032
]
118029312
03036 Chromosome and associated proteins [BR:
palz03036
]
118029312
03400 DNA repair and recombination proteins [BR:
palz03400
]
118029312
DNA replication proteins [BR:
palz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
118029312
DNA Replication Termination Factors
ELG1-RFC complex
118029312
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
118029312
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
118029312
Check point factors
HRAD17(Rad24)-RFC complex
118029312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
Mg_chelatase
AAA_11
AAA_16
AAA_14
AAA_5
AAA_24
AAA_assoc_2
SLFN-g3_helicase
AAA_2
ResIII
nSTAND3
AAA_19
DUF3853
AAA_30
DNAX_ATPase_lid
PhoH
AAA_28
AAA_25
RNA_helicase
AAA_7
Parvo_NS1
DUF815
NPHP3_N
TIP49
bpMoxR
AAA_17
AAA_18
IstB_IS21
NB-ARC
AAA_23
Motif
Other DBs
NCBI-GeneID:
118029312
NCBI-ProteinID:
XP_034889064
LinkDB
All DBs
Position
5:complement(17341136..17345028)
Genome browser
AA seq
342 aa
AA seq
DB search
MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
AIAHQLYGPELNKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGVYPCPPYKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEIMS
NRILHICNEEGLTLDTEALSTLSSVSQGDLRRAITYLQGAARLFGSSISSKDLISVSGAI
PREVTEAIYAACKSGDFDVANKEVKYVIAEGYPVSQMLAQLFEVVVEEDDISDEQKVRIC
KSLAMADKCLVDGADEYLQLLDVVSNTMRALCNMPQEFSYDI
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcgccattattgcagagctcacagccatgggtggagaaatatcgaccaaagcaagta
aaggatgtagctcaccaagatgaggttgttcgcgtcctcactaacactctcgagaccgca
aattgcccacacatgcttttttatggcccacctggtaccggaaaaaccaccactgccctg
gccatcgcacaccagctctacgggcctgaactcaacaagtctagggttctggaactaaat
gcaagtgatgaccgtggaatcaatgttgttcggactaagatcaaggattttgctgctgtg
gctgtaggttctggtcagcgtcaaggggtttacccttgtccaccttataagattatcatc
ctagatgaggcagattcgatgactgaagatgctcagaatgccctgagacgtacaatggaa
acttactccaaagttactagattcttcttcatatgtaattacattagcaggatcatagag
ccacttgcttcaagatgtgcaaaattcaggttcaagccacttccagaagaaatcatgagc
aatcgtatattgcacatttgtaatgaagaaggcctcactctggacacagaggctctctca
accttaagctctgtctcacaaggtgatcttcgccgggctatcacatacttgcaaggagct
gctcgcctatttggatcgtcaatttcatccaaagacctcataagtgtgtcaggggccatt
ccacgagaggttactgaggcaatttatgcagcatgcaaaagtggtgactttgatgtggcg
aacaaggaagtaaaatatgtaattgcagaaggatatccagtctctcagatgcttgctcag
ttatttgaggtggtggttgaagaagatgacatatcagatgagcaaaaggttcgcatatgc
aagagtttggctatggctgataagtgtcttgttgatggtgcggatgagtatttgcagctg
ctggatgtggttagcaacacaatgcgagctctttgcaacatgccacaagaattctcttat
gatatttag
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