Populus alba (white poplar): 118029646
Help
Entry
118029646 CDS
T07314
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Module
palz_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118029646
Enzymes [BR:
palz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
118029646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
TraW_N
PITH
NosD
Motif
Other DBs
NCBI-GeneID:
118029646
NCBI-ProteinID:
XP_034889432
LinkDB
All DBs
Position
17:635781..637364
Genome browser
AA seq
396 aa
AA seq
DB search
MAGLPLPMIPRPITLFFIVFFAFSPSAKAAQFSVLSYGAKPDGKTDSTKAFAAAWAHACA
STQPATISVPKGSFSLGQVRFQGPCKNRAILLRIDGTLVAPSDYKVIGNAKNWLIFEHVN
GVTVSGGTLDGQGAGLWSCKNSGNGCPRGATSLEFTNSNNIAITGLASLNSQLFHIVING
CQNVKVQGVKVSAAGNSPNTDGIHVQSSTGVTILNSRIGTGDDCVSIGPGTSSLWIENVA
CGPGHGISIGSLGKESQEAGVQNVTVKTATFTGTQNGLRIKSWGRPSNGFARDILFQHAV
MNNVQNPIVIDQNYCPGEKNCPGQVSGVKISDVTYQDIHGSSATEVAVKFDCSKKYPCTG
IKLEDVKLTYKNQPAEASCSNAGGLASGLVQPTSCL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcaggccttccacttccaatgatccctcgtcctattacccttttcttcatcgttttc
tttgcgttctcaccttcagcaaaggcagcgcaatttagtgtgttaagttatggtgccaaa
cctgatggaaaaaccgactcaaccaaggcctttgctgctgcttgggcacatgcatgtgcc
tcaacacaaccagccacaatttctgttcctaaagggagtttctctttaggtcaagtgagg
tttcagggtccttgcaagaaccgtgcgatcttgctacgtatagatggcaccctagtcgcc
ccatcagattataaggtcattggcaacgctaaaaattggctaatctttgagcatgttaat
ggggttactgtatctggagggactcttgatggccagggtgctggactgtggtcttgcaag
aattccggcaatggttgccctagaggcgcaacgtcacttgagtttaccaattcaaacaat
attgcaatcaccggattggcgtcattaaatagccagttgtttcacattgtcatcaatggt
tgccaaaacgtcaaagttcaaggagtcaaagtctctgccgccggaaacagccctaacacg
gatggcattcacgttcaatcatcaaccggtgtcaccatattgaattctaggattggaaca
ggtgacgactgtgtatcgattggccccggcacctcgagtttgtggattgaaaatgtcgca
tgtggacctggccatggaatcagcattggaagtttaggcaaagaatcccaagaggctggt
gtgcaaaatgtgacagtaaagacagctacatttaccggtacacaaaatggactgagaatt
aagtcttggggaaggcctagcaatggttttgctagagatattcttttccaacacgcagtc
atgaataatgtccagaatcccattgtaatagaccaaaactattgccccggcgagaagaac
tgccctggccaggtttctggtgtgaaaataagtgatgtgacctaccaagacattcatgga
tcatcagcaacagaagtggcggtgaaatttgattgtagcaaaaaatatccatgcactggg
atcaaattagaagatgtaaagctcacttacaagaaccagccagcggaagcatcatgcagc
aatgctggtggacttgcttcaggacttgttcagcccactagctgtctataa
DBGET
integrated database retrieval system
