Populus alba (white poplar): 118029659
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Entry
118029659 CDS
T07314
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Module
palz_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118029659
Enzymes [BR:
palz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
118029659
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
TraW_N
PITH
Motif
Other DBs
NCBI-GeneID:
118029659
NCBI-ProteinID:
XP_034889446
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Position
17:464499..466116
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AA seq
396 aa
AA seq
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MAGLPLPMIPRPITLFFIVFFAFSPSAKAAQFSVLSYGAKPDGKTDSTKAFAAAWAHACA
STQPATISVPKGSFSLGQVRFQGPCKNRAILLRIDGTLVAPSDYKVIGNAKNWLIFEHVN
GVAVSGGTLDGQGAGLWSCKNSGKGCPRGATSLEFTNSNNIAITGLASLNSQLFHIVINS
CQNVKVQGVKVSAAGNSPNTDGIHVQSSTGVTILNSRIGTGDDCVSIGPGTSSLWIENVA
CGPGHGISIGSLGKESQEAGVQNVTVKTATFTGTQNGLRIKSWGRPSNGFARDILFQHAV
MNNVQNPIVIDQNYCPGEKNCPGQVSGVKISDVTYQDIHGSSATEVAVKFDCSKKYPCTG
IKLEDVKLTYKNQPAEASCSNAGGLASGLVQPTSCL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcaggccttccacttccaatgatccctcgtcctattacccttttcttcatcgttttc
tttgcgttctcaccttcagcaaaggcagcacaatttagtgtgttaagttatggtgccaaa
cctgatggaaaaactgactcaaccaaggcctttgctgctgcttgggcacatgcatgtgcc
tcaacacaaccagccacaatttctgttcctaaagggagtttctctttaggtcaagtgagg
tttcagggtccttgcaagaaccgtgctatcttgctacgtatagatggtaccctggtcgca
ccatcagattataaggtcattggcaacgctaaaaattggctaatctttgagcatgttaat
ggggttgctgtatctggagggactcttgatggccagggtgctggactgtggtcttgcaag
aattccggcaagggttgccccagaggcgcaacgtcacttgagtttaccaattcaaacaat
attgcaatcaccggattggcgtcattaaatagccagttgtttcacattgtcatcaatagt
tgccaaaacgtcaaagtgcaaggagtcaaagtctctgccgccggaaacagccctaacacg
gatggcattcacgttcaatcatcaaccggtgtcaccatattgaattctaggattggaaca
ggtgacgactgtgtatcgattggccccggcacctcgagtttgtggattgaaaatgtcgca
tgtggacctggccatggaatcagcattggaagtttaggcaaagaatcccaagaggctggt
gtgcaaaatgtgacagtaaagacagctacatttaccggtacacaaaatggactgagaatt
aagtcttggggaaggcctagcaatggttttgctagagatattcttttccaacacgcagtc
atgaataatgtccagaatcccattgtaatagaccaaaactattgccccggcgagaagaac
tgccctggccaggtttctggtgtgaaaataagtgatgtgacctaccaagacattcatgga
tcatcagcaacagaagtggcggtgaaatttgattgtagcaaaaaatatccatgcactggg
atcaaattagaagatgtaaagctcacttacaagaaccagccagcggaagcatcatgcagc
aatgctggtggacttgcttcaggacttgttcagcccactagctgtctataa
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