Populus alba (white poplar): 118029872
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Entry
118029872 CDS
T07314
Name
(RefSeq) vacuolar protein sorting-associated protein 35A
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
palz
Populus alba (white poplar)
Pathway
palz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118029872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118029872
Membrane trafficking [BR:
palz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
118029872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FliS
Urb2
Motif
Other DBs
NCBI-GeneID:
118029872
NCBI-ProteinID:
XP_034889719
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Position
5:9093989..9101194
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AA seq
793 aa
AA seq
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MIADGVENEEKWLAAGIAGLQQNAFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKY
YELYMRAFDELRKLEMFFKEEARRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDVLKDLVEMCRGIQHPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVVDAVEFVL
QNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQIEGVDLDMYKDTVLP
RVLEQVVNCKDEIAQFYLMDCIIQVFPDEYHLQTLEILLGACPQLQPSVDIKTVLSRLME
RLSNYAASSAEVLPEFLQVEAFSKLNNAIGKVIEAQVDMPIFGAVTLYSSLLTFTLHVHP
DRLDYADQVLGACVKKLSSKGKLDDSKATKQIVALLSAPLEKYNDIVTALKLSNYPRVME
YLDIETNKIMATVIIQSIMKNNTHISTADKVEALFELMTGLIKDLDGAEEEVDEDDFKEE
QNSVARLIQMLYNDDQEEMFQIICTVKKHIMTGGPKRLPFTVPPLVFLSLKLVRRLQGSS
QDQEENPFGDDSSTSPKKIFQLLNQTIEALSIVPAPELALRLYLQCAEAANDCDLEPVAY
EFFTQAYILYEEEVSDSKAQVTALHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKP
DQCRAVYGCAHLFWVDDQDNMKDGERVLICLKRALRIANAAQQMSNAARGNTGSVLLFVE
ILNKYLYFYEKGNPQITVAAIQSLIELITTEMQSDNSPPDPAADAFLASTLRYLQFQKQK
GGAISEKYEAIKV
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcagacggagtggaaaacgaagagaaatggttagcggcagggatcgctggcctt
caacaaaacgctttttacatgcatcgcgctctggattcgaataatttaagagatgctttg
aagtactcagcgcagatgttatcggagttgcggacttcgaagctttctcctcataagtat
tatgaattatatatgagagcatttgatgaattgaggaagctggagatgttttttaaagaa
gaggcacggcgtgggtgttcaattattgatttgtatgaacttgtgcagcatgctggtaac
atcttgccgagattgtatctcctatgtactgtaggatctgtatacattaaatctaaagaa
gctccagcaaaagatgttcttaaagatcttgttgaaatgtgtcgcggcattcagcatcct
gtacgtggcctcttcttaaggagttacctttcccaagtcagtagggataaattacctgat
atcggttcagagtatgaaggagatgctgacacggttgtggatgctgtggaatttgttctg
caaaatttcactgagatgaacaagctatgggtgcgaatgcaacaccagggacctgcccgg
gaaaaggagaagcgggagaaagaaaggagcgagctgcgtgatcttgttggcaagaacctg
catgtcctcagccagatagagggtgttgaccttgacatgtacaaagatactgtgcttccc
agagttcttgaacaggttgtcaattgtaaagatgaaatcgctcagttctatctgatggat
tgcataattcaagtcttccctgatgaatatcatttgcaaactcttgagatattgttgggt
gcttgcccccaacttcagccatctgttgacatcaagacagtgttatctagattgatggag
aggctatcaaattacgctgcttcaagcgcagaagttttacctgaattcttgcaagtagaa
gccttctccaaattgaacaatgccataggaaaggtgatagaagcacaagtggatatgcca
atttttggagctgtaactctatattcatctcttcttacatttactcttcatgttcaccct
gaccggctggattatgctgatcaagtgctgggagcatgtgttaagaaactatccagcaaa
ggaaagcttgacgacagcaaagccacaaaacaaattgttgctcttttgagtgctccatta
gagaaatataatgatattgtcactgcattgaagctttcaaactatcctcgtgtaatggaa
taccttgatattgagacaaataaaattatggcaactgttataattcaaagtattatgaaa
aataacacacacatctctactgctgacaaggttgaggcgttatttgaattaatgacaggg
cttatcaaggatctggatggggctgaagaagaggttgatgaagatgatttcaaagaggag
cagaattccgttgcacgtcttattcagatgctgtacaatgacgatcaagaggaaatgttt
cagatcatatgtacggtgaagaagcatatcatgacaggaggaccaaagcgcctacccttc
acagttcccccacttgtgtttttgtctctcaagttggtaaggagacttcaaggcagcagc
caagatcaggaggaaaacccttttggagacgattcatcaacttcacctaagaaaattttc
cagctcttgaatcagacaattgaggctctgtcaattgttccagcacctgaattggcatta
cgattgtacttgcagtgtgctgaggctgccaatgactgtgatctagagcctgttgcatat
gaatttttcacccaagcatatattctatacgaggaagaagtctcagattcaaaagcacag
gtgacggcattgcatttaataataggcacccttcagaggatgcatgtttttggtgtagag
aatagggatactttaacccacaaggccacggggtattcggctaagcttttaaagaagcct
gatcagtgtagagcggtttatgggtgtgcacatctattctgggttgacgatcaggataac
atgaaagatggagagagggttctgatttgcctgaagcgtgctttgcgaattgcaaatgct
gctcaacaaatgtccaatgcggcgcggggtaacactggatcagtgttgctctttgttgag
attctgaacaagtatctttacttctatgagaagggaaacccacaaatcacagtggctgca
atccagagcctgattgaattgattacaactgagatgcaaagtgacaacagtccaccagat
cctgctgctgatgcattcttagccagcacacttagataccttcagttccagaaacagaaa
ggtggtgcaattagtgaaaaatacgaggccatcaaggtgtga
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