Populus alba (white poplar): 118029906
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Entry
118029906 CDS
T07314
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like 3
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
palz
Populus alba (white poplar)
Pathway
palz03440
Homologous recombination
palz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118029906
03460 Fanconi anemia pathway
118029906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palz03032
]
118029906
03400 DNA repair and recombination proteins [BR:
palz03400
]
118029906
Enzymes [BR:
palz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
118029906
DNA replication proteins [BR:
palz03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
118029906
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
118029906
Bloom's syndrome complex (BTR)
118029906
FA (Fanconi anemia) pathway
118029906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
DUF4619
ResIII
ETS_PEA3_N
Motif
Other DBs
NCBI-GeneID:
118029906
NCBI-ProteinID:
XP_073265458
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Position
5:complement(8820039..8826097)
Genome browser
AA seq
780 aa
AA seq
DB search
MKKSSLPMVQNTSSKDEKRTRKETLVKLLRWHFGYQDFRGKQLEAIEAVLSGRDCFCLMP
TGGGKSMCYQIPALAKHGIVLVVSPLIGEXILYIFENQVIALKEKGIAAEFLSSTQTSSV
RNKIHEDLDSGKPSLRLLYVTPELIATPGFMLKLTKIHTRGLLNLIAIDEAHCISSWGHD
FRPSYRKLSSLRNHLPDVPVLALTATAAPKVQNDVIESLCLQDPLVLKSSFNRPNIYYEV
RYKDLLDDAYADLSSVLKSCGDVCAIVYCLERATCDGLSAHLSKNGISSAAYHAGLNNKL
RSSVLDDWISSKIQVVVATVAFGMGIDRKDVRMVCHFNIPKSMESFYQESGRAGRDQLPS
KSLLYYGVDDRKKMEFILRNAENKKLQSSSSGGELSKKSLTDFNLMIEYCEGAGCRRKKI
LESFGEQVSATLCKKSCDACKHPNLVAKYLEELTTSIACQRNGFSRVFMSRSTDMIDEEF
RIDEQISEFWNRDDEAKSSEEDISDFDDETEAVKSLPRSRLSRKSGVDEKIELLQRAEEN
YYQNKNFDKLKNKVDKNAISETLREASKQRLLNALKLAHQRLGILNIELDTSASFLENEC
YKKYGKSGKTFYYSQVASTVRCLSSTTLVELTNRLCPGTPSVPVSKEHPPETPPSPSLEQ
RPPETTNLKRQSSFKSPLLEQKSPETTTLRLHHTFQSETSMNTSPSESSSLSSKLPSIPS
FSEFVNGXKGRRQPCQYITKPITRETGKDRREEAEVALTQILELCFSLFVVMYTLVVGLE
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcatcgttgccaatggtgcaaaacacaagcagcaaggatgaaaagagaaca
agaaaagaaacactagtgaagctgttaagatggcatttcgggtatcaagattttagaggc
aaacagttagaagccattgaggctgttttatcagggagggattgtttttgtttgatgcca
actggtggagggaagtcaatgtgttatcaaattcctgctcttgctaaacatgggattgtt
cttgtcgtgtctcctttgattggtgagtaaattctttatatttttgagaaccaagtgatc
gccttgaaggagaaaggaatagcagctgaatttctttcatcgactcaaacatcaagtgtt
agaaataaaattcacgaagatctggactctggaaaaccatctttgaggctgctgtatgta
acaccagaattaattgcaacaccaggatttatgttgaagctgacaaagattcacaccaga
gggttgttgaatctcattgccatagatgaggcacattgcatttcgtcatggggtcatgat
ttcaggcctagctaccgtaagctttcatctttgaggaatcaccttccagatgtaccagtc
ctggctttgacagctacagctgctcccaaagttcagaacgatgtgatagagtcattatgt
ctgcaagaccctttggttctcaaatcttctttcaatcgtccaaatatttattatgaagtt
cgatacaaagatcttctggatgatgcctacgctgatttatcctctgtactcaaatcttgt
ggggatgtctgtgcaattgtttactgccttgaacgagcaacctgtgatggcttgtctgct
catctttccaaaaatggcatttcctctgctgcttaccacgctggcttgaataataaactg
cggagctcagttttagatgattggatttcttctaaaatacaagttgttgtggccacagtg
gcttttgggatgggtatagatagaaaagatgttagaatggtttgccactttaacattcca
aagtcaatggagtccttctatcaagaatcaggtagagcaggacgtgaccagcttccatcc
aaaagtctcttgtactatggagttgatgatcgaaaaaagatggagttcattttaagaaat
gctgagaacaagaagctgcagtcctcaagttcagggggcgagttgtcaaaaaagtccctc
actgacttcaatctgatgattgagtactgtgaaggtgctggatgccgtcggaaaaagatt
cttgagagttttggggaacaggtttctgccacactatgtaaaaaatcatgtgatgcctgc
aaacatccaaatctagttgccaagtatttggaggaacttacaactagcattgcttgtcag
agaaatggtttttctcgagtttttatgagcaggtccacagatatgattgatgaagaattc
agaattgatgaacaaatctctgaattctggaatcgggatgatgaagccaaaagttctgag
gaagatatatctgattttgatgatgaaacggaagctgtcaagagcctacctagatcaaga
ttgtcaagaaaatcaggagtagatgagaagattgagttgctgcagcgtgcggaagaaaat
tattatcagaataaaaactttgataaactgaaaaataaagttgacaagaatgccatatct
gaaacactgagagaagcaagcaagcaaagattattaaatgctttgaagctagctcaccag
cggcttggaatcttaaacattgaacttgatacatcggcctccttccttgaaaatgagtgc
tacaagaagtacggaaagagtgggaaaacgttctactattctcaggtggcaagtacagta
aggtgcctatcatcgacaactttggtagagttaacaaatcggctctgccctggcacccct
tccgttcctgtgtctaaagaacatcctcctgagacaccaccatcaccctcgcttgagcag
aggccaccagaaactactaacctaaaacgccagagtagctttaaatcacccttgcttgag
cagaagtcaccagaaactactactctaagactccaccatacatttcaatcagaaacttcg
atgaatacttcaccatcagaaagttccagcctgagttcaaagctgccatccattccgtcc
ttttccgagtttgtgaacgganaaaaaggaagaaggcaaccatgccaatacatcacaaaa
ccaatcacacgtgagactggaaaagaccggagagaagaggctgaggttgcattaactcaa
attttggagctttgtttttctctcttcgtagttatgtacacactagtagtcggtctggaa
taa
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