Populus alba (white poplar): 118029938
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Entry
118029938 CDS
T07314
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
palz
Populus alba (white poplar)
Pathway
palz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
118029938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palz03400
]
118029938
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
118029938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
Motif
Other DBs
NCBI-GeneID:
118029938
NCBI-ProteinID:
XP_034889822
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All DBs
Position
5:complement(8496353..8505295)
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AA seq
1321 aa
AA seq
DB search
MGIIKRLPVSARSTMRSGILVFDLTRVVEELVFNSLDAGAKKVSVYVAVGTCYVKVSDDG
CGISRDGLVLLGERYVTSKVQHLADMDVASGNFGFRGEALSSIADVSVLDVLTKARGMPN
GYRKVMKGSKCLCLGIDDDIKDVGTTVVVRDLFYNQPVRRKYMQSSPKKILHLVKKCALR
VALMHSEVSFKVVDIESEEELLCTNPSSAISLLMSGFGIEDSSSLHELNISDGVLKLSGY
VSGPCSSFSIKAFQYVYINSRFVCKGPIHKLLNHLASRFEHPVLQKANSVSQKGKKIRPQ
PCPAYILNLSCAFSLYDLTFEPSKTHAEFKDWNPILAFIEKVVQQLWRECTVIGESSTQV
TDTFQKNDIWQEGNDITSVKQDFFDADFSGFAIKKGGVKIHQSSHHLISCPLKMLNKEVD
HLFHGKHDKVPQEFYSNVSEFKEEQVDKEFVLQDNCFLEDSFTTRERLSDHMQSHFSSSE
WQNESPKIDSVARNESPGSAFSIDHYGFRNELPFSKSNIKPILQSCSSQKSLSLDRDFFA
GKEAFEFLNDVSKNKRRRLCTAENVGIPKGDTIFDIFPCALPQDNASCTQRLPADTDGAE
MSAAFDLLPGAYVNSSSPNGKLLAKGKGLASNSILQLEMYASGNHSSMSDWCSVTSSAFF
QAKAWDAEHFPDDNASEGSKGWGKKENCWHLPDSWEIMSKPSSQDNFFSSCTSSVLDFKN
SADSSKDICKLRQWQDQNNEFSRQHSDISVGETDWLLLDPGSKDPKRNDECDRQENQLRY
KAFFQAKAWDAEHFPDDNASEGSKGRGKKENCWHLPDSWEIMSKPSSQDNFFSSCTSSVL
DFKNSADSSKDICKLPQWQDQNNEFSLQHSDISVGETDWLLLDPGSKDPKRNDECERQEN
QLRYKACVRDRAAKERSRRSNSTPPFCRLKRRFISLNNHSMRKEEEPYTQLFHDWLTSPE
ANDFEHLPLQPSHVEEDLTQRTKSNGKNMPDTMPNKETPEGNPEHFQHPKAYDSSPEGFM
PKDTQESMDYRIKWRNGCQQIANHNTSSNVGSQRNILDISSGFLHLAGNLLVPESIHKNC
LQDARVLNQVDKKFIPIVAGGTLAVIDQHAADERIRLEELRQKVLSGEEKTVTYLDAEQE
LILPEIGYQLLHNYAEQVREWGWICNIQGSGTFKKNLNILHQQPTVITLLAVPCILGVNL
SDGDLLEFLQQLSDTDGSSTLPPSVLRVLNYKACRGAIMFGDSLLPSECSLIVEELKQTT
LCFQCAHGRPTTIPVVNLEALQKQIAKLGLLNDGSNDLWHGLRRQELSLERAAQRLSAAR
G
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgggtataattaagcgattgccggtgtcagcacgcagcacaatgcgttcagggatcttg
gtgtttgatttaacaagagttgtagaggagcttgtttttaatagcttggatgctggtgct
aaaaaggtttcggtttacgtggctgttgggacctgctatgtgaaagtttctgatgatgga
tgtgggatttcacgggatggattggtgttactgggagaaagatacgtgacctcaaaggtt
caacatttggctgatatggatgttgctagtggaaactttggcttccggggagaagctttg
tcttctatcgctgatgtctcagtgttagatgtattgacaaaagctcgtggaatgccgaat
ggatatcgcaaggtcatgaagggatctaagtgtttgtgtttgggaattgatgatgatatt
aaagatgtcggcactacagttgttgttcgtgatttattttacaaccaaccagttcggagg
aaatatatgcaatccagccctaagaagatactgcacttggtaaaaaaatgtgcacttcgt
gttgctcttatgcattcagaggtgtcctttaaagttgttgatattgaaagtgaggaggag
cttctctgcacaaatccatcttctgcaatatcactgttgatgagtggatttggaatcgaa
gattccagctctcttcatgaactgaatatcagtgacggtgtattaaagctttctggctat
gtatctggtccttgcagtagtttttccatcaaggctttccaatatgtttatatcaattca
cggtttgtttgcaaaggcccaattcacaaattgctaaatcacctggcctctagatttgag
catccagttctgcagaaggctaacagcgtgtcccaaaaaggaaagaaaatcaggcctcaa
ccatgtccagcttatattttaaatttgagttgcgctttctctctctatgatttaaccttt
gagccgtcaaagacacatgctgaattcaaggattggaatcctatccttgccttcattgag
aaggtcgttcaacaactctggagggaatgcaccgttattggagaatcctccactcaggta
acagatacgttccagaaaaatgacatttggcaggaaggtaatgatatcacatcagtgaaa
caagatttttttgatgcagatttttctggatttgcaataaagaaaggcggggttaaaatt
caccagtcttctcatcatcttatttcttgccctttgaagatgctaaacaaagaggttgac
catctttttcatgggaagcatgataaagttcctcaagaattctactcaaatgtttcagaa
ttcaaagaggaacaagttgataaggaatttgttcttcaggataattgcttcttggaagat
agtttcactaccagggaaagactcagtgatcacatgcagagccatttctcaagctcagaa
tggcaaaacgagtccccaaaaattgattccgtggcaagaaatgaatctcctgggagtgca
ttctccattgatcattatggattcagaaacgaattaccgtttagcaagagtaatataaaa
cccattttacagagttgctcctcacagaaaagcctgtcacttgatagggatttttttgct
ggcaaggaagcatttgaatttcttaatgatgtctccaagaacaaaagaagacggctttgc
acagctgaaaatgtgggtatcccaaaaggggatacgatatttgatatctttccctgtgct
ttaccacaggacaatgcatcgtgtactcagcggttgcctgcagatactgatggagctgag
atgtctgcagcttttgatcttctgccaggtgcttatgtaaattcttcttcaccaaatgga
aaacttttagctaaagggaaaggtcttgcatctaattctatcctacaattagaaatgtat
gcctcaggaaatcattcatcaatgtctgattggtgttctgtaacttcaagtgcttttttt
caagcaaaagcttgggatgctgaacactttccagatgataatgcaagtgaggggagcaag
ggatggggtaaaaaggaaaattgttggcatcttcctgacagctgggagattatgtcaaag
ccttccagccaagataacttcttctcaagttgtacaagcagtgtgttagattttaaaaat
tcagctgattctagtaaagatatctgcaaattgcgtcagtggcaggatcaaaataatgaa
ttttctcgacaacattcagatatatctgttggtgagacagactggctccttttggaccca
ggttctaaagatcctaaaaggaatgatgagtgtgacaggcaagagaatcaactaagatat
aaagctttttttcaagcaaaagcttgggatgctgaacactttccagatgataatgcaagt
gaggggagcaagggaaggggtaaaaaggaaaattgttggcatcttcctgacagctgggag
attatgtcaaagccttccagccaagataacttcttctcaagttgtacaagcagtgtgtta
gattttaaaaattcagctgattctagtaaagatatctgcaaattgcctcagtggcaggat
caaaataatgaattttctttacaacattcagatatatctgttggtgagacagactggctc
cttttggacccaggttctaaagatcctaaaaggaatgatgagtgtgaaaggcaagagaat
caactaagatataaagcttgtgtacgagatcgtgctgccaaagaacgatccagaagaagc
aattcaaccccaccattttgcagactgaagaggaggtttatttccttaaacaaccactca
atgaggaaagaagaagaaccatacacacagttgttccatgattggctcacttctccagaa
gctaatgactttgagcatctacctctccagcctagtcatgtggaggaggatttaacccaa
agaaccaaatccaatggaaagaacatgccagataccatgccgaacaaggagactccagaa
ggaaatccagagcacttccaacaccctaaggcttatgattcttcacctgaaggctttatg
ccaaaggacacccaggagtcaatggattataggatcaaatggcggaatggctgccaacaa
attgcaaatcacaacacgtcatccaatgttggcagtcagcgaaatatacttgacatctct
tcggggttcttgcatcttgctggaaatttattagttccagaatctattcataagaattgc
cttcaggatgccagagtccttaatcaggtagacaagaaattcatcccaattgtagctggt
gggacacttgctgttatagaccagcatgcagcagatgaaaggattcgactggaagaactt
cgtcaaaaggtattatctggagaagagaagacagttacctatcttgatgctgagcaagag
ctgatacttcctgaaatagggtatcagctacttcacaattatgctgaacaagtaagagaa
tggggatggatctgcaatattcaaggttcagggaccttcaagaagaatttgaatattctc
caccagcagccaactgtgattacacttcttgcagtaccatgcattttaggggtcaatttg
tctgatggagatctcttggaatttctgcagcagctttctgatacagatggctcttcaact
ttgccgccatcagttcttcgtgtgctcaattataaagcatgcagaggcgcaatcatgttc
ggagattcgttgctaccatcagaatgttcacttattgtcgaagagctaaagcagaccaca
ctttgttttcaatgtgcccacgggcgaccaacaactattcctgttgtcaacctggaggcg
ttgcaaaagcagatagcaaaacttggattgctaaatgatggttcaaatgacttatggcat
ggattacgccgacaggaactcagccttgaacgtgcagcacagcgtttaagtgcagctaga
ggctag
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