Populus alba (white poplar): 118029988
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Entry
118029988 CDS
T07314
Name
(RefSeq) agamous-like MADS-box protein TM6
KO
K09264
MADS-box transcription factor, plant
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palz03000
]
118029988
Transcription factors [BR:
palz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
118029988
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
K-box
DUF1664
DUF3256
Phasin_2
DivIC
Cor1
DASH_Dad3
Herpes_BLRF2
Motif
Other DBs
NCBI-GeneID:
118029988
NCBI-ProteinID:
XP_034889887
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Position
5:complement(9668491..9670438)
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AA seq
229 aa
AA seq
DB search
MGRGKIEIKKIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTNKFHEYISP
STTTKKIYDQYQKALGIDLWSAQYEKMQEQLRKLTDINHKLKKEIRQRIGEDLNELSIDH
LRVLEQNMTEALNGVRGRKYHVIKTQTDTYKKKVRSLEERHGNLWMEYEAKMEDPRYGFV
ESEGDYESAAALVNGASNLYAFRLHQGHHHHHPNLHLAGGFGPHDLRLP
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtggaaagattgagatcaaaaagattgaaaaccccactaacaggcaagtcacc
tactcaaaaagaagaaatggtattttcaagaaagcccaggaactcactgttctttgtgat
gctaaggtctctcttatcatgttctccaacaccaacaaattccatgagtacattagcccc
tccacgacgacaaagaagatctacgatcaatatcagaaggctttaggcatagatctgtgg
agcgctcaatacgagaaaatgcaagagcaattgcggaagctgacagatatcaatcataag
ctgaaaaaagaaatcaggcagaggataggagaggacctcaatgaattgagcattgatcat
ctgcgcgttcttgaacaaaatatgactgaagccttgaatggtgtccgtggcaggaagtac
catgttatcaaaacacaaaccgacacctataaaaagaaggtaaggagtttggaggagaga
catggaaacctctggatggaatatgaagcaaaaatggaggatccacgatatggattcgtg
gaaagtgaaggagattatgaatctgctgctgctcttgtaaatggggcttccaacctctat
gcattccgcctgcaccaggggcaccaccaccaccatcctaatcttcaccttgctggtggg
ttcggacctcatgacctccgtcttccttga
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