Populus alba (white poplar): 118030203
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Entry
118030203 CDS
T07314
Name
(RefSeq) uncharacterized protein isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
118030203
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
118030203
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
118030203
NCBI-ProteinID:
XP_034890099
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Position
5:13053831..13060676
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AA seq
732 aa
AA seq
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MWKRLHSFAGSLRDFGGCTRHNNGASSSCQNPGGGDLDRGQRASRVNKGGPAMPFQAVRL
YIQDHHVVMDNGIVQVTLSKPAGIVTGIRYDGIDNLLEVLNRETNRGYWDLHWNPPGGQG
IFDVISGTSFRVVVENDEQVELSFTRMWDSSLEGKYIPLNIDKRFILLRGSSGFYSYAIY
EHLQEWPGFDIGETRITFKLRKDKFQYMAIADNRQRLMPLPDDRLPGRCQALAYPEAVML
VNPKLPELAGEVDDKYQYSCENKDNQVHGWICFKPPVGFWQITPSDEFRTAGPLKQNLTS
HVGPTTLAMFHSSHYAGKDLVLSISPGEPWKKVFGPVFIYLNSASNGEDPLFLWEDAKVQ
MMAEVQSWPYSFPASEDFQKSEERGSVYGRLLVKDRNISDDYILASGAYVGLAPPGDVGS
WQTECKDYQFWTRADENGYFSIKNTRTGDYNLYAWVPGFLGDYRWDAIMNIISGFLPQTL
AISFEYCFSMIDVTEFKNHAGCDMDMGDLVYEPPRDGPTLWEIGIPDRSAAEFYIPGPDP
KFMNNLYANHPDRFRQYGLWGRYADLYPDTDLVYTVGLSDYRKDWFFAQVVRRKDDDTHV
GTTWQIKFKLDKVDRNSSYKLRVAIASATLAELQFLVVSFSKVRVNDAKAQRPLFTSGLI
GRDNAIARHGIHGLYRLYNVNIPGARLVEGENTIFLTQPRCTSPFQGLMYDYIRLEGPPF
SGSSNEASSSFK
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaagattgcacagttttgctggttctctccgtgactttggcggatgcacgcgt
cacaacaacggcgcttcctcctcttgtcaaaatcctggaggtggagatttggatcgcggt
caaagagcttcaagagttaacaagggtggtcccgccatgccatttcaggcagtgcgattg
tatattcaagatcaccatgtggtgatggataatggcatagtacaagttaccttatcgaaa
ccagctggaattgttaccgggatacgatatgatggcattgacaatttgcttgaagttctc
aatcgtgaaacaaatagagggtactgggatcttcactggaatccacctggaggccaggga
atatttgatgtgattagtggaacaagtttcagggtcgtagtggaaaatgatgagcaggtt
gagctctcatttacaagaatgtgggattcctcacttgaaggcaaatacattcccttgaat
atagataaaaggtttatattgctacgtggttcctcaggcttctactcatatgccatttac
gagcacttgcaggaatggcctggttttgatattggcgaaacaaggattacttttaaactc
cggaaagacaagtttcagtacatggccatagcagataacaggcaaagattgatgccccta
ccagatgaccgcttgccaggaagatgtcaagccctggcttatccagaagctgtcatgctt
gttaatcccaaactgccagagctcgcaggagaggtggatgacaagtaccaatattcatgt
gaaaacaaagataatcaagtccatggatggatatgcttcaagcctccagtggggttctgg
caaatcacaccaagtgatgaattccgaactgctgggcccctgaaacagaacctcacttct
catgtaggccccaccactcttgctatgtttcatagttcacattatgcgggaaaagatctg
gtactgagtataagccctggtgaaccatggaagaaagtttttggccctgtttttatctat
cttaattctgcatcaaatggagaggaccctctctttctgtgggaagatgctaaagtgcag
atgatggctgaagtccaaagctggccatacagcttccctgcctctgaggatttccaaaag
tcagaagaacgagggagtgtttatggaagactactagtcaaagacaggaatataagtgat
gactatatactagcaagtggtgcttatgtggggttggctccccctggagatgttggatca
tggcaaacagaatgcaaggactaccaattctggaccagagcagatgagaatggctatttc
tctattaaaaacacacgcaccggcgactacaatctttatgcatgggtccctggatttctt
ggagattacagatgggatgctatcatgaacataatttctggttttcttcctcaaactcta
gcgatttcttttgagtactgtttttcaatgatagatgttacagagttcaaaaatcatgca
ggttgtgatatggatatgggtgatcttgtgtacgagcctccaagagatgggcccacactc
tgggaaataggcatccctgaccgttccgctgctgagttctatattccaggtcctgatcca
aagtttatgaataatctatatgccaatcatcctgacagatttcggcagtatggtttgtgg
ggcagatatgcagatctgtaccctgatacagatttggtttacacagtcggtctcagtgac
tacagaaaagactggttctttgctcaggttgtcaggagaaaagacgatgatacacatgta
ggaaccacatggcaaatcaagttcaaacttgacaaagtggatcggaacagtagctacaaa
ctgagagtggcaattgcatctgcaaccctagcagaattgcagtttttggtggtatctttt
tcgaaggttcgtgttaatgatgcaaaagcacaacgtccgctatttacaagcggattgata
gggagggacaacgcaattgctagacatgggattcatgggctctaccggctgtataatgtg
aatattcccggagctcggctagttgaaggagagaataccatcttcttgacgcagccaaga
tgcaccagccctttccagggtctcatgtatgactacatacgtctagaaggtcctcctttt
tctggatccagtaatgaagcttccagttcatttaagtaa
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