Populus alba (white poplar): 118030248
Help
Entry
118030248 CDS
T07314
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Pathway
palz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118030248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118030248
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118030248
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
118030248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
Pox_Ag35
Nop14
Motif
Other DBs
NCBI-GeneID:
118030248
NCBI-ProteinID:
XP_034890180
LinkDB
All DBs
Position
4:6900870..6904145
Genome browser
AA seq
372 aa
AA seq
DB search
MRKFLLEDGEGSSYPRPKRQGPSSPSSPPPEFPMEEIAREEEDSDEEEEDDDDEDEDTSD
ESEEEDEEEVEEIVRPPPRPPQQQNNQMETVGLQLLQPRLYESPIFLEPTLVRPSRNGAI
FVAISDPEVLDCPTCCETLTIPVFQCENGHVACSSCSKKLQHKCPSCAMPIGDNRCRAME
KVLESLKAQCSNWRYGCRENICFSKKYEHDKCCSHALCTCPLLGCNFQGSSEQLYLHCRR
KHLGKLTSFQFNTSFPLFITVNDKFCILQEDKEGVLFILNNRSDTLGHVITVSCMGLSSS
KPGYFYELMTRAEGSNIRFQSSTRNVQTRVDDPPSLGCLLVPNDFLGTYGQITLDVCIWR
LGSYPAISSVRA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaattcttacttgaagatggagaaggttcaagctatccaaggccgaaaagacaa
ggaccctcttctccctcctctcctcctcctgaatttcctatggaagaaattgctcgtgag
gaagaagattctgatgaagaagaagaagatgatgatgatgaagatgaagacacaagtgat
gaaagtgaagaagaagatgaggaggaggtggaagaaatagtgagaccaccaccacgacca
ccacaacaacaaaataatcagatggaaactgtgggactacaactactacaacccagatta
tatgagagtccaatctttctagaacctaccctcgtgaggcccagcagaaatggagctatt
tttgtagctatatcagacccagaagttcttgattgtcccacctgctgtgaaaccttgacc
attcctgtttttcagtgtgagaatggacatgtagcttgttcttcatgcagcaaaaaactc
caacataagtgtccttcttgcgctatgcccattggtgataaccgttgtcgtgccatggag
aaggttcttgaatcattgaaagcacaatgctccaattggaggtatggatgcagagaaaac
atttgtttcagtaagaagtacgaacatgacaagtgttgtagccatgcactgtgcacatgc
cccctgttgggttgcaacttccagggctcatctgagcaattgtacctacactgtagacgt
aaacatttaggcaagttgacaagtttccaattcaataccagcttccctcttttcattact
gtcaatgacaaattctgtattcttcaagaagataaagaaggtgttttattcattctgaat
aatagatcggatactcttggacatgtgatcactgttagttgtatggggctttcttcatca
aagccaggatacttttacgaacttatgacaagagcagagggaagcaatatcagattccaa
tcttccacaagaaatgtccaaaccagagttgatgaccctccatcgctggggtgccttcta
gtaccaaatgatttccttggtacttatgggcagataaccttggacgtctgcatctggcgt
cttggctcatatcctgccattagctctgtaagagcatga
DBGET
integrated database retrieval system
