Populus alba (white poplar): 118030518
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Entry
118030518 CDS
T07314
Name
(RefSeq) ATP-dependent DNA helicase pfh1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palz03032
]
118030518
03029 Mitochondrial biogenesis [BR:
palz03029
]
118030518
Enzymes [BR:
palz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
118030518
DNA replication proteins [BR:
palz03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
118030518
Mitochondrial biogenesis [BR:
palz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
118030518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Pif1_2B_dom
AAA_22
SLFN-g3_helicase
AAA_5
ATPase_2
DEAD
AAA_16
NPHP3_N
nSTAND_NTPase5
Herpes_Helicase
ResIII
ABC_tran
NACHT
AAA_14
NB-ARC
UvrD-helicase
T2SSE
PhoH
AAA_7
NTPase_1
NAT10_TcmA_helicase
Mg_chelatase
nSTAND3
TsaE
AAA_11
cobW
FUSC-like
ATP-synt_ab
Sigma54_activat
ATPase
UvrD_C_2
AAA_24
AAA_29
Motif
Other DBs
NCBI-GeneID:
118030518
NCBI-ProteinID:
XP_034890541
LinkDB
All DBs
Position
7:7673594..7677446
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AA seq
540 aa
AA seq
DB search
MLSLLPFCFLEPLRSESKLLLYQKQTCDNAQRLYFSACKEKLECARSMKFFSSAIIAVYR
RSFSTQSSRTTKHAQSVYQNRIKKETNRIPKANKTHQPLFEWTQEQKNIFSHVRRGASVF
ITGSAGTGKTVLLKHIIDILKDVHGNSKVFVTASTGIAACALQGQTLHSFASIGIQNADS
GTLLDKVKMNKHACKRWKKAKALVIDEISMISADLFESLEYIARDIRGSEVVWGGMQLIV
CGDFFQLPPVIKQQKLSGKEFAFEADCWNASFDLQVELTQVFRQSDPRLIKMLQGIRKGE
TDAEDLQLLEESCSMNKQDSLVVWLYPRINDVEKVNEERMKSLGESTVTYAAADSGLEHR
KKQLNQGIVPDQLALCVGARVMLIMNLNIERNLCNGATGTVTGFVPVEDKNARKSDILFP
QVKFDRGPEILIEPQKFEIFEGDIVVAWRYQIPLILAWAISIHKCQGMTLDHAQTDLSRA
FGYGMVYVALSRVRSLEGLHLSGFTPSKIKAHPKVLLFYKSFTSSNLSHTEFSLLHRVRK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgctctctttgctgccgttttgcttccttgaaccattgaggtccgagtctaagctcctt
ctctatcagaagcagacgtgtgataacgctcaaagactctacttttcagcatgtaaagaa
aagcttgaatgcgctagaagtatgaagttttttagctctgcaataatagctgtatataga
agaagttttagcactcaaagcagcagaaccacaaaacatgctcaaagtgtttaccagaat
cgaatcaagaaggaaaccaataggatccccaaggccaacaaaacccaccaacctttattt
gaatggacccaagaacaaaaaaatattttttctcatgttcgcagaggtgcttctgtgttt
atcacgggctccgccggaactggaaagacagttttgcttaagcacattatcgacattctg
aaggatgttcatggtaattctaaggtttttgtcacggcatccactggaattgctgcctgt
gcacttcaagggcaaactcttcactcctttgccagcattggaatccaaaatgctgattct
ggaactttgctggataaggttaaaatgaataagcatgcttgcaaaagatggaaaaaggca
aaggcattggttatagatgaaattagtatgatcagtgctgatttgttcgagagcctggaa
tatattgctagagatatacggggatcggaggtggtatggggtggaatgcagcttattgtc
tgtggggatttctttcagctaccaccagttataaaacaacagaaattatcaggcaaagaa
tttgcatttgaagctgactgttggaatgcaagctttgacctgcaggttgagcttactcag
gtttttaggcagtcagaccctcggcttatcaagatgcttcagggaataaggaaaggggag
actgatgcagaggacttgcagcttctagaagaatcttgctccatgaacaagcaggattct
ttggtagtctggctctatccgagaatcaatgatgtggagaaagtaaatgaggagagaatg
aaaagcttgggtgagagtactgtaacttatgcagctgctgatagcggcctcgaacatagg
aagaaacaactcaaccaagggattgtacctgaccaacttgcactctgtgtaggtgcaagg
gtaatgttgattatgaatttgaatattgaacgtaatctttgtaatggtgccactggtaca
gttacaggatttgttcctgtggaggataaaaatgctagaaagtctgatattctcttccca
caagttaaatttgatcgtggacctgaaatcttgattgaacctcaaaaattcgaaattttt
gagggagatattgtagttgcttggagatatcagatacctttgatattagcatgggctatc
agcatacataagtgccaagggatgactcttgatcatgctcaaacagatctctcaagggct
tttggctatggaatggtctatgtggcactttcccgagtaaggagcttggaaggccttcat
ttgtctggtttcactccatcaaagatcaaggcacacccaaaagttctgctattctataaa
agttttacttcatcaaacctctctcatactgaattctcattattacaccgagttaggaaa
taa
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