Populus alba (white poplar): 118030583
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Entry
118030583 CDS
T07314
Name
(RefSeq) DNA repair protein rhp7
KO
K15082
DNA repair protein RAD7
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palz03400
]
118030583
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
118030583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_NXF1-5
LRR_6
LRR_RPS2
LRR_At1g61320_AtMIF1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
118030583
NCBI-ProteinID:
XP_034890643
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Position
6:complement(20257013..20263191)
Genome browser
AA seq
681 aa
AA seq
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MDSGEKKEKEKWGLDLNLSIQEEFSTGLGFQEFLGEEKEAENDQLGHDFGRDSDFRIRER
DSVVETDDFTSSKRLRYTIEEKGKAKVDCGGSQVNLDFDLNLDLWGFEKDPVEGKMDTWP
FEAGLLSSGPVMHNFFPDSVERNTQVDNYDVPRKDNVFEQRKEIALSSVRKRQSRRKEQK
LMQREIARNVAPRFAHLGPQEQMKQHKEKKVKLREADLEMEPDLDDSQSPFSLALEAIKM
RQTVRKGSSTGFSESLFKWVPAKAKDCDALKRDVPTLLDLSLNALAKNADAIVSLEHVPD
KLRHRLSQLVSDCGVVDAHFVELLARGSPTEIRLRNISRLTEEEFSKIFSVCDTKDLTVL
QLDLCGRCMPDYILHGTLARSSHRLPSLATISLKGAHRLSDIGLTQLAVSAPALQSINLS
QCSLLTSQGISDFVSCFESTLRELYIDDCQNIDAAIILPALKKLKCLEVLSVAGIETVCD
NFVIGLVKACGINMKELGFANCMQLTDISLRIVGKNCPNLCALDLSYLHNLTDSALKHLA
NGCQSIRRLKLCRNDFSDEAIAAFLEVSGQSLDALSVNNIHRVAHNTALSIAKCSRNLVS
LDLSWCRRLTDEALGMIVDSCLSLKLLKLFGCTQITEAFLNGHSNPMVRIIGCKTGPVLE
HLGALEPQENPLRYSPLTSFC
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggattcaggggaaaaaaaagaaaaggaaaaatggggtcttgatttaaatttatctata
caggaggagttttcaactggtttagggtttcaagaatttttaggggaagagaaagaagct
gaaaatgaccaactgggtcatgattttggtagagatagcgattttaggataagggaaaga
gactccgttgttgaaacggatgattttactagtagtaagagattgaggtacacaattgaa
gagaaggggaaggctaaagttgactgtggtggtagtcaagtgaatcttgattttgatctt
aatcttgatttgtggggatttgagaaagacccagttgaagggaaaatggatacatggcca
tttgaagcagggttattgagttcaggacctgttatgcacaatttctttcctgacagtgta
gagagaaatacccaggtggataattatgatgttccaagaaaggacaacgtttttgaacaa
agaaaggagatagctctgtcaagtgtgaggaagagacaatcaagaagaaaggaacagaag
ttgatgcagcgtgaaatcgctaggaatgttgctccacgatttgcacatttaggtccccaa
gagcagatgaagcagcataaagaaaagaaagttaaattgagagaagctgatttggaaatg
gaaccggacttggatgattctcaaagtccattttcattggcactggaagcaatcaaaatg
cggcaaactgttcgaaaagggtcatcaactggtttctctgagtcgctcttcaaatgggtt
cctgcaaaagccaaagattgcgatgctctgaaacgcgatgttcctacacttctggacctc
agtttgaatgctcttgcaaaaaacgctgatgctattgtgtcacttgaacatgttccagat
aaattacggcatagacttagtcagttggttagtgattgtggggtagtggatgctcacttt
gttgaacttcttgcaaggggatctccaactgaaattcgtctgaggaatatttcgcggttg
acagaagaggagttttccaaaatatttagtgtttgtgacaccaaggacttgactgtgcta
caacttgacctctgtggacgatgcatgcctgattatatattacatggcaccttagccagg
tcatcacatagacttccttccttagctaccatatctttgaagggtgcccatcgtttgtca
gatattggactaactcagttggctgtgtctgcacctgcattacagtctataaatctgagc
cagtgctcccttctcacatctcaaggcatcagtgattttgttagctgttttgaatctact
ttgagggagctgtatatagatgattgtcagaatatagatgcggcaattattttacctgca
ctgaagaaactcaagtgcctagaagtgttgtcagtagcaggcatcgagactgtttgtgac
aattttgtcattggactggtcaaagcatgtggcataaacatgaaagagcttggtttcgct
aattgcatgcaactgactgatatatcacttcgaattgtaggcaaaaattgtcccaactta
tgtgctctggatctttcttacttgcataacttgacagactctgcattaaaacacctagcc
aatggttgccaatcaattaggagactcaaactttgccgaaatgatttcagtgatgaagct
atagctgccttcttggaagtctctggacagtctctggatgcgctttcagttaacaatatc
catagggttgctcacaacactgccttatcaattgccaaatgttcaagaaatttggtgagt
ttggacttatcatggtgccgcagattaacagatgaggcactaggaatgattgttgatagc
tgcttatcgctgaagctgctcaagctatttggatgcacgcagattacagaagcatttcta
aatggccactcaaaccccatggtgcgaatcattggatgtaaaactggaccagtgttggag
catcttggtgcgcttgaacctcaagaaaatcctttgcgatattctccactgacaagcttt
tgctga
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