Populus alba (white poplar): 118030600
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Entry
118030600 CDS
T07314
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118030600
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
118030600
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
118030600
NCBI-ProteinID:
XP_034890663
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Position
6:complement(19781733..19785998)
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AA seq
389 aa
AA seq
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MGNSHAHGDHRKFRNNGNVPSPDKTASAPSPSQPVPPSIYQPEHILIPNSSIHASYMATS
LPYSHVDSALRALAAQAEGFGRCAIGGLHGPIYYVTTLLDDGPGSLRDGCRKKEPLWIVF
EVSGTIQLGSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDVDGI
QIKPNSKHIWIDRCSLRDYDDGLIDINRESTDITVSRCHFAQHDKTMLIGADPTHVGDRC
IRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYIRNWGIYAVCASVESQIYSQCNIYEAGQK
KIAFKYLSEKAADKEEASSGCIRSEGDLFVIGAQAGLMTEDGEFCMFHPSEYYPTWTAEP
PTDSLKQVLQHCTGWQCVPRPADHPLAAQ
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgggaaactcccatgctcatggtgatcaccgcaagttccgtaataatggaaacgtccct
tcccccgataaaactgcttctgctccttcaccatcacaacctgtaccgccctctatttat
caacccgaacacattcttattcccaactcatcaatccacgcatcctacatggctacctct
ttgccttactctcatgtcgactctgccttgcgtgctcttgctgcccaggccgaggggttc
ggtcgctgtgccatcggtggcctccatgggcccatttattatgtcaccacgttattggat
gatggccctggatcacttagagatggatgtcggaaaaaagagccactttggattgtcttt
gaagtatcaggcaccattcagcttggatcttacttgaatgtctcgtcttataaaaccatt
gatggccggggtcaaagaataaaacttacaggcaagggtttgagactgaaggaatgcgag
catgttattatatgcaatctagagtttgaaggtggtagaggacctgatgttgatggcatt
cagataaaacccaattcaaagcatatatggatagaccgttgcagccttcgtgactatgat
gatgggctgatagatatcaaccgagaaagcactgatattactgtttctaggtgtcacttt
gcgcaacatgataaaacgatgctcattggagctgatcctactcatgttggtgacagatgt
attcgagtaaccattcaccattgcttttttgatggaacacggcaacgccatcctcgtgtt
agatttggaaaagtacatttatacaataactacatcagaaactggggcatttatgctgtt
tgcgccagtgtagagtcacagatatactcccaatgcaacatatatgaagcaggacagaag
aagattgcatttaagtatctctctgagaaggcagctgacaaggaggaagcaagtagtggc
tgcataaggtctgaaggagacttatttgttattggagctcaagcagggttaatgactgag
gacggtgaattctgtatgtttcatcccagcgaatattaccccacatggacagcagaacct
cccacagatagtcttaaacaggttctccagcattgtacaggatggcagtgtgttccacgg
ccagctgatcatccattagctgcacagtga
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