Populus alba (white poplar): 118030604
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Entry
118030604 CDS
T07314
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33 isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
palz
Populus alba (white poplar)
Pathway
palz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118030604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
palz03041
]
118030604
Spliceosome [BR:
palz03041
]
Common components
Common spliceosomal components
SR proteins
118030604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
zf-CCHC_3
RRM_occluded
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
118030604
NCBI-ProteinID:
XP_034890666
LinkDB
All DBs
Position
6:19843481..19846691
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AA seq
297 aa
AA seq
DB search
MPRYDDRYASTRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMKRDYAFVEFSDPRDADDA
RHYLDGKDFDGSRIIVEFAKGVPRGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWK
NKCYRCGERGHIERNCKNSPKKLTRRGRSYSRSPGRSRSPHRGRSRSPSYSRGRSYSRSR
SPPPKRERSVENENRSLSPEPKSTKARKRSPTPDEGTPRRPSPKSRKLDDEQDREYSGSP
MGRSRSRSPRDQRYRSPQTNGRSRSPSPRDDRSPVDDDYEDNNRSPRDRDRDSDVSR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgatatgatgatcgatatgccagtacgcgtctctatgttggacacctggctgct
aggacacgatcacgggatctggaacatcttttcagcaaatatgggcgagtacgagatgtg
gatatgaagcgtgactatgcgtttgttgaatttagtgatcccagagatgctgatgatgca
aggcattacttagatggcaaggattttgatggaagtcgtatcattgtggaatttgcaaag
ggggtacctcgtggttctcgagaatatttgggcagaggtcctcctccaggatctggacgc
tgctttaattgtggcattgatggccactgggctcgagattgcaaagctggagactggaag
aacaagtgttatcgatgtggggaaagaggtcatatagagagaaactgcaagaacagtccc
aagaaactcactaggcgggggaggagttactctcgatcaccaggtagatcacgctctcct
caccgtggcagaagccgcagcccaagttatagccggggtcgaagctacagccgatcaaga
tccccaccaccaaagagagagcgaagtgttgagaatgagaacaggtcattgagccctgaa
ccaaagagtacaaaggccaggaagcgcagcccaacacctgatgaaggcaccccacgccgc
ccttctcccaaatctcgaaaactggatgatgagcaagatagagagtacagtggcagcccc
atgggaagaagcagaagcagaagccctcgagatcagaggtacagaagtcctcagactaat
ggtcgcagccgcagtccgagtcccagggatgatagaagccccgttgatgatgattatgag
gacaacaaccgctccccgagagatagagatagagatagtgacgtgtcacgttga
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