Populus alba (white poplar): 118030631
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Entry
118030631 CDS
T07314
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
118030631
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
118030631
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
CarboxypepD_reg
Endotoxin_C
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
118030631
NCBI-ProteinID:
XP_034890699
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All DBs
Position
6:20058018..20063421
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AA seq
678 aa
AA seq
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MITKMKNVRCRGGSHLTSVVWLIIFCFFTAAFAKTPVRKIPRTSDSSALGVQLDLKNRQR
VVIDNGLVEVTFSRPDGDVTGIKYKGIDNVLEIGNDEDNRGYWDVVWNKPGDSIIFDRLV
ATDFRVIMEDENQVEVSFTKTWDLSMGKSTVPLNVDKRYIVRRGQSGLYLYTILERLEGW
PDVDMDQIRVVFKLQKDKFHYMALSDSRKRIMPMPEDRASGQPLAYPEAVLLTKPINPEL
RGEVDDKYQYSCEDNDNKVHGWTAEDPPVGFWMITPSNEFRVGGPNKQDLTSHVGPVVLN
MFTSTHYAGKDLNTAYRNGEPWKKVLGPVFVYLNSISPTEDSSILWEDAKEQMSIEVNRW
PYDFPQSEDFPSSDQRGAVTGQLLVRDRYVTESLTYASSAYVGLAAPGDVGSWQTESKGY
QFWIRADRHGHFVIKNVRAGNYSLYAWVPGVIGDYKYDANITINPGSRIRFGHLVYEPPR
NGPTLWDIGIPDRSAAEFYVPDGYPTLMNKLYTSDPAEKFRQYGLWNRYSDLYPNDDLVY
TIGISNVEDWFFAHVTRDAGNKTYDPTTWQIIFELENANRNENYTLRLALASATASEIQV
RFNNPSSDRPLFTTGAVGKDNAIARHGIHGLYWLYGIDVPGSQLVEGKNTIYLTQARSDG
PFHGVMYDYIRLEGPRGT
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgatcacaaaaatgaagaatgtgcgttgtcgtggcgggtctcatctgacctcggtcgtc
tggctcatcatcttctgcttcttcacagctgctttcgcgaagaccccagtcagaaaaatt
ccaaggaccagcgacagctcggctcttggggttcagctagatttaaagaatcgtcaacgg
gtggtgattgataatggactcgtcgaagtcacattctcccgtccagatggtgatgttacc
ggaatcaaatacaaaggaatcgacaacgtgcttgaaatcggcaacgatgaagataatcga
ggatactgggacgtggtctggaacaagccgggagattccatcatcttcgacaggttagta
gcaacagattttagagtgataatggaagatgaaaaccaagtggaggtatccttcaccaaa
acatgggatctttcaatgggaaaatccacagttcctttaaatgtagacaaaagatatata
gtaaggcgtggccagtcggggctctacttgtacaccatattggaacgcttggaaggatgg
cccgatgttgacatggatcaaattagagtcgttttcaagctccaaaaagacaagtttcac
tacatggcattatcggactccaggaaaaggatcatgccaatgcctgaagaccgcgcaagt
ggccagcctctggcttatcccgaagctgttcttctgaccaaaccgataaacccagaactt
agaggagaggtggatgacaagtaccagtactcatgcgaggacaacgataacaaggtgcac
gggtggactgcagaggacccccctgtgggattttggatgattacacccagtaatgaattc
cgtgttggtggacccaacaagcaggatcttacttcccatgtgggccccgttgttctcaac
atgttcacgagcacacattatgctggaaaggacttgaatacagcatacagaaatggagag
ccatggaaaaaggtccttggcccggtattcgtctatcttaattctatttcaccgacagaa
gattcctcgatactttgggaggatgctaaggaacagatgtcaatagaagtcaaccggtgg
ccatacgattttcctcaatcagaagatttcccttcttcagatcagcgcggtgctgtcact
ggccaattactagttcgtgaccgatacgtcactgagagtttaacgtatgcctcctctgct
tatgtgggcttggccgcgccaggagatgtgggctcatggcaaacagaatccaagggttat
caattctggattcgagctgacagacacgggcattttgtgattaaaaatgtcagagctggg
aactatagtttgtatgcatgggttcctggtgtcattggggattacaagtacgatgctaat
ataacaattaatccaggatctaggatcagatttggtcaccttgtatacgagcctccaaga
aatggtcctactctgtgggacataggcattcctgaccgctcagctgcagagttctacgta
ccagacggatacccaacactgatgaataaattgtacaccagtgatccagcagaaaagttt
aggcaatatggattgtggaaccgatactccgatttatatcccaacgatgatctcgtttat
accattggtattagtaatgttgaagactggttctttgcccatgttaccagagatgcagga
aataagacgtacgacccaacaacatggcagattatctttgaactcgaaaatgctaaccga
aatgaaaactacactctccgattggccttggcttcagctactgcatccgaaatacaggtt
cggttcaacaatccaagcagcgatcggccactattcacaacaggagccgtaggaaaggat
aatgcgattgcaagacatgggattcatgggttgtactggttgtatggcattgatgtccca
ggctctcagcttgtcgagggaaaaaatacaatttatctcactcaggctagaagtgatggc
cccttccatggtgtcatgtatgattacattcgtttagaaggaccaagaggaacttga
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