Populus alba (white poplar): 118030817
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Entry
118030817 CDS
T07314
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13210
far upstream element-binding protein
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118030817
03041 Spliceosome [BR:
palz03041
]
118030817
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
118030817
Spliceosome [BR:
palz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118030817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
118030817
NCBI-ProteinID:
XP_034890990
LinkDB
All DBs
Position
6:21122195..21128748
Genome browser
AA seq
701 aa
AA seq
DB search
MADESQYSTATDTTPPSSNKRKYDDQSAPPPSTRRQTGFSSPISDPAPPPSYNSVAPPAD
EIQMAKQKAQEIAARIMSGAGADIKRPRAENGASGFDSSENNKGFSSAPLDMKSTMSNSV
PSSIPVSYGSYLGGSGSSKKIDIPQGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADP
NSPTRMVELMGTPEQIAKAEQLINDVLAEGTYSGECFAVQAEAGGSGTVSQRFTGHGGSE
HFAMKIPNNKVGLVIGKGGETIKNMQARSGARIQVIPLHLPPGDTSAERTVHIEGTSEQV
ETAKQLVNEVTSENRMRNPNMGGGYPQQGYQARPPTNWGPSSAPPMQPAGYGYMQTGAYP
GASAQYNMSQPAYQGYPPQQPSGGYPSNWDQSAVSANQQNQVYDYYSQPPSSQQQTPGAS
AAPADSTGYNYSQAPASGYNQQGQGYSQDGYGGYQQPGYGQPPPYDQQQGYTSAPNYSNV
ANPTQEGHAPSYGAQADSAQASSQPSATGQQGYSTGQQPSPNPASYPSQGAAQPGYGLPP
SSQAGYGSQPPAQYASYGAPQSQKPPANPPVYGQSQQSPSTPGGYGQPAGQPGYPPSQPP
PSGYVQQPDSGSQRAAPSSYGAAGAQPGYAAPTYGAPPVGQPGYGQGAQPYNASYGSGYP
QPAAYSADGNAANNARGTYELAPASQTASQQSGVAKASPQS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaatctcaatactcaacggccactgacaccacaccaccatcatccaacaaa
cgcaaatatgatgaccaatcagcaccgcctccgtcgacacgtaggcaaactggattctca
tctccgatttctgaccccgctccacctccatcttacaacagcgtggcgccgcctgctgac
gagatccagatggctaaacagaaagctcaggagatcgccgctcgtataatgagtggtgct
ggtgctgatattaagcgacccagggctgaaaacggtgcgagcgggtttgattccagtgag
aataacaagggattcagctctgctcctctagatatgaagtctaccatgtcaaactcagtc
ccttcatcaattccagtttcatatggctcatacctgggtggttctggttcgagtaaaaaa
attgacattcctcaaggcagggttggtgttatcattggtaaaggtggagagactatcaaa
taccttcagcttcagtctggagcaaaaattcaggtcactcgagatatggatgcagatccc
aactccccaaccagaatggttgagcttatgggcactcctgaacaaattgccaaggcagag
cagttgatcaatgatgtccttgcagagggtacttatagtggtgaatgttttgctgtccag
gctgaggcagggggttctggtacagtttcccaaaggtttacaggtcacggtggttctgaa
cattttgcaatgaagattcccaacaacaaggttggtctggttattggcaaaggtggtgag
acaattaagaatatgcaagctaggtctggagcccgcattcaggttatacctttgcatctg
cccccaggtgatacatctgcagaaagaacagttcacatagagggcaccagtgagcaggtc
gagactgcaaaacagttggttaatgaagtcaccagtgagaatcgtatgaggaatccaaac
atgggtggaggttatccccagcaaggatatcaagctcggccacctacaaactggggtcca
tcttctgctccaccaatgcagccagctggctatggctacatgcagactggagcataccct
ggcgcatcagcacagtataatatgtctcagcccgcttatcaaggctatcctccacaacag
ccatctggtggatacccctctaactgggaccagtcagctgtctcagcaaatcagcaaaat
caagtttatgattactatagtcagccaccttcatctcagcaacaaacccctggtgcttct
gcagctccggcagacagcactggttataattacagtcaggcaccagcttctggttataac
caacaagggcagggttatagtcaagatggctatggtgggtatcaacagcctgggtatggt
cagccgccgccgtatgatcaacagcaaggttatacttctgctcctaactatagcaatgta
gctaacccaactcaggaaggacatgctccttcatatggagctcaagcagattcagctcaa
gcttcatctcaaccatccgcaacaggacagcaaggttattctactggccagcagcctagc
ccaaacccagcaagttatccatctcagggagctgctcagcctggttatggattacccccg
tcttcccaagctggctacgggagtcaaccacctgcacagtatgcaagctatggagcacct
caatcacagaaacctccagccaatccacctgtttatgggcagagccaacagtcacccagc
acccctggaggctatggccagcctgctggacagccaggatatccaccctcccagccacca
ccatctggctatgtgcagcaaccagattcaggttcccagcgtgcggcaccatccagttac
ggtgctgcaggtgctcagccagggtatgctgctcctacttatggtgcaccaccagttggc
caaccaggttatggacagggggctcaaccatacaatgcttcttatggtagtggttatcca
cagcctgctgcatattcggctgatggcaatgcagctaacaatgctcgcgggacatatgaa
ttagcaccagcatcacagactgcttctcaacagagtggagtggctaaagcatcaccacaa
agttga
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