Populus alba (white poplar): 118030843
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Entry
118030843 CDS
T07314
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118030843
Transcription machinery [BR:
palz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
118030843
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
118030843
NCBI-ProteinID:
XP_034891030
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Position
6:21322862..21328379
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AA seq
559 aa
AA seq
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MGVGFRLTPKWGSPMQSHSVTNSTSMFSSFSARGMEASVNQARLSFLSVVSEEGDILNKH
SFKSFACSSAAQNVENDCLQMERLKMNVDKTSHVSMNNMMGNDKVSVEEEISTSHTRLGE
RTTSRFSFLLDNLDTLEKLVADLDALKLERDILLQLGRLGALEFFNACLSRSLQTSNVLD
LSAVPTENTGESKTDGMLDDHTVKPVVRTGKKEERKFRRERAAPDNEKKTTSLSLPSKTV
QNNLQKPTFVKRTSSSSSRRSLIARNEAKMTRGLKVASDLERIRTTLEKETGQVVSLSCW
AEATGLDKKVLQQQLQFGWYCRDELIKNTHSLVLYIARNYRGMGIAMEDLILAGNLGVLQ
GAERFDPSRGYRFSTYVQYWIRKSMLKIVERHARGIQIPYALSRSINKIQKARKALSNSH
GRYPDDWEVAKFTGLSLAKIESAKKCLRVVASLDQKIGEGHHAKYSEFIPDMSIQNPEEA
VTRQHMREEIYDLLRGLDSRERQVMVLRYGFKDNQPKSLAEIGRLFHVSKERVRKIEKKI
MIKLRDEGIRRNLSRYVIL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgggttttaggctaactcctaagtggggttctccaatgcagtctcactctgtc
accaattctacatccatgttctcatccttttctgctagaggcatggaggcttctgtcaac
caggcaaggttgtcttttttgtctgttgtttccgaagagggtgatattctcaacaaacat
tctttcaagtcttttgcttgctcatctgcagcacaaaacgtggaaaatgattgcttgcaa
atggaaagactgaagatgaatgtggacaagacgtctcatgttagcatgaataacatgatg
ggtaatgataaagtgtctgttgaagaggaaatttctacctcacatacacgcttgggagag
cgaacgacatcgcgttttagctttttgttggacaatcttgatactttagagaagctggtt
gctgacttggatgcactgaagttggaaagggacattttgctgcaattaggaagacttgga
gctctagaatttttcaatgcctgtctatcaaggtcccttcaaacttccaatgttttggac
ctgtctgctgttcctactgagaatacaggagagagtaaaacagatggcatgttagatgat
cacacagttaaacctgttgttcgcactgggaaaaaggaagaaagaaaatttagaagagaa
agagctgccccagacaacgaaaaaaaaactacttctttgtctctgccttcaaagactgtc
caaaataatcttcaaaagcctacctttgtgaaaagaacatcaagctctagtagtagacga
tccttgatagcaagaaatgaggcaaaaatgacgaggggactcaaggtggcttcagacttg
gagagaatcagaacaactttagagaaagaaaccggacaagtagtcagtttaagttgctgg
gctgaagcaactggacttgacaaaaaggtgctgcagcagcaattgcaatttggttggtac
tgtcgagatgagctcataaagaacactcactccttagttttatacattgcaaggaactac
aggggaatgggaatagccatggaagatttaattctggctggaaatttgggagtcttacaa
ggtgcagaaaggtttgatccctcaagggggtacaggttctcaacctatgtccagtattgg
ataaggaaatctatgttaaagattgttgagcggcatgctagagggatccaaattccttat
gcattaagccggtcgataaacaagatacaaaaagctcgaaaagccctcagcaacagccat
ggcagatacccggatgactgggaggttgctaaattcacaggtctatctctggctaaaatt
gaatcagctaagaaatgtctcagagtcgtggcttcacttgatcagaaaataggagaaggt
caccatgctaaatattcggaatttatccctgatatgtcaattcagaatcctgaagaggct
gtcacgaggcagcacatgagagaagaaatctatgatctcttgcgaggtttggattcaaga
gagaggcaagtgatggttctgagatacgggttcaaggacaatcaacccaaatcacttgca
gagatcgggaggctattccatgtaagcaaagagcgtgtgaggaagatcgagaaaaaaatc
atgataaaattgagggatgaaggaatccgcagaaatctgagtcgttatgtgattttgtag
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