KEGG   Populus alba (white poplar): 118031276
Entry
118031276         CDS       T07314                                 
Name
(RefSeq) lysine-specific demethylase JMJ28
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
palz  Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:palz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:palz03036]
    118031276
Enzymes [BR:palz01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     118031276
Chromosome and associated proteins [BR:palz03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    118031276
SSDB
Motif
Pfam: WRC JmjC zf-4CXXC_R1 Serglycin YhdP
Other DBs
NCBI-GeneID: 118031276
NCBI-ProteinID: XP_034891519
LinkDB
Position
11:17471854..17479618
AA seq 1022 aa
MEALPDHLRCKRTDGRQWRCNRRVMEDKKLCEIHHLQGRHRQYRRKVPENLKLQRKKSKK
SATSSSNAETLIRVSSKGGKLGKFKKKGKKLKRGDLQLDLIRMVLQKEMEKRKSKKRKSF
SEKVSVDNGDDNDNVNDCSESEEGEGEELMRNLPNGFMAISPAKSFGNGNVGCSSSHCDI
KIGGDVSNGASTARRCFRSKNVEPMPVGKLQVLPYKRDGVRLRKGKRKKCHWCRNSGSRT
LIRCSSCRKEYYCLDCIKEQYLETQEEVRMECPMCRGTCRCKVCSAIQCRDIACKDLSKG
KSEVDDVLHFHYLICMLLPILKQINQDQSIELEIEAKIKGQKPSEVQIQQAEVSCNKQCC
CNNCKTSIVDFHRSCPECSYNLCLSCCRDIFHGGVHGGVKTLLCKCPNERKACIPGKQLS
EMKSLCATKQSYGSKYLGSTFSPCQSAVDRNGGIPCPSRKFGGCGGSLLDLSCIFPLCWT
KDLEVSAEELVGCYELPETLDVRSCCALCVGMDCESNGIGQLQEAAAREDSGDNHLYYPT
IMDVRSDNLEHFQKHWGRGQPVIVRNVLQSTSDLSWDPIVMFCNYLKNNAARSQNGQATD
CSDWFEVEIGIRQMFMGSFKGLTNANIWHEKLKLKGLLSSYLFQEHFPAHYSHVLQALPL
PEYMDPISGVLNIAADLGQETSKSDLGPCLYISYGSGENLSQSDSVTKLRYNSYDVVNIL
AHATDVPVSTKQLNYIRKLMTKHKDQNKESGEAPLDEENIEVELHDMFREDMQVNKKVAR
VSWFSAARHETHASNLRDRDVFHDGDSDSGSGSGSGSDSDSHTDTDTEVSKFFFGPVKSS
RSSDNLKFHGNHSETSNHFISESCGAQWDVFRKQDVPKLVEYLRRHSNEFTHTYGFQKHM
IHPILDQNFFLDAYHKMRLKEEFKIEPWSFDQHIGEAVIVPAGCPYQIRNLKSCVSVVLD
FLSPENVTECIQLMDELRQLPENHKAKVDSLEVKKMALHSINRAVRKIHELTRAETSMDL
NG
NT seq 3069 nt   +upstreamnt  +downstreamnt
atggaggcactaccggaccacctccggtgcaagagaacagacggccggcaatggcggtgc
aaccggcgggtgatggaggataagaagctctgtgaaattcaccaccttcaaggccgccat
aggcagtatagaaggaaagttccagagaatttgaaattgcagagaaagaagagcaagaaa
tcagcaacatcaagttctaatgctgaaaccctaattagggtttcttcaaaaggggggaaa
ttagggaaatttaagaagaaaggaaagaaattgaagagaggggatttacagttggatttg
attaggatggtgttacagaaagaaatggagaagaggaagagtaagaaaaggaaaagtttt
tcggagaaagtaagtgttgataatggtgatgataatgataatgtgaatgactgtagtgag
agtgaagaaggagaaggagaagagttgatgagaaatttgccaaatgggttcatggcaata
tcacctgctaagagttttgggaatggcaatgtgggttgttctagttcacattgtgatatt
aagattggaggagatgtttctaacggggctagtactgctagaagatgttttaggtctaaa
aatgttgagccaatgccagttgggaaattgcaggttttgccgtataagagggatggagtg
agattgaggaaggggaagaggaagaagtgccactggtgtaggaatagtggatcgaggaca
ttgattaggtgttcgagttgtcggaaagagtattattgcttggattgcatcaaagagcag
tatttggaaacacaagaagaagttaggatggaatgtcctatgtgtcgtggaacctgcagg
tgtaaggtctgctcagcgattcaatgtagggacattgcatgtaaggacttgtccaaggga
aaaagtgaagtagacgatgttttacattttcattatttgatttgcatgcttcttcccata
ctgaaacaaataaatcaagatcagagcattgagctagaaatagaggcgaaaataaaaggc
cagaagccttctgaagttcaaatccagcaggctgaagtcagctgcaataagcaatgttgc
tgcaataactgcaagacttccatagtggatttccataggagctgtcctgagtgttcctat
aacctttgcttaagttgttgtcgggatatttttcatgggggcgtacatggaggtgttaaa
actcttttatgcaaatgtccaaatgaaaggaaagcttgtatacctggcaaacaactttca
gaaatgaaatcactttgtgccacaaagcagagttacggcagcaaatatcttggttcgaca
ttctcaccttgtcagagtgctgtggatcgtaatggtggtataccttgtccctctagaaag
tttggaggttgtggtggtagcctacttgatttgagttgcattttccccttatgttggaca
aaagatctggaagtaagtgcagaagaattagttggctgctatgagttaccagaaaccttg
gatgttcgatcatgttgcgcattatgtgttgggatggattgtgaatctaacgggattgga
cagctgcaagaagcagctgcaagagaagattctggtgataaccatttatattatccaacc
atcatggatgttcgtagtgataacctagaacactttcagaagcactggggcagaggtcag
cctgtgatagttcgtaatgtgcttcagagtacatctgatttgagttgggatccaatagtc
atgttctgcaattatcttaagaataatgctgccagatctcaaaatgggcaagctacagat
tgctcggactggtttgaggtagaaattggtataagacagatgtttatgggctcttttaag
ggcctgacgaatgccaacatatggcatgagaagctgaaattgaagggtttgctttcttct
tatttattccaggaacattttccagctcattatagtcacgtccttcaggctctaccactt
ccagaatacatggaccccatttcaggtgttctaaacattgctgcggatttggggcaggaa
acctcaaagtctgatctgggtccttgtctttatatctcatatggaagtggtgagaatctt
tcacagtctgattctgtgacaaaactgcgttataattcatatgatgtggttaatattttg
gcacatgctactgatgtccctgtatctacaaaacagcttaattacataagaaagttaatg
acaaagcacaaggaccagaataaagagagcggagaagcacctttagatgaggaaaacatt
gaagtggaattgcatgatatgttcagagaagatatgcaagtaaacaagaaagttgctaga
gtatcctggttctctgctgcaagacatgaaactcatgcttcaaatctgagagatagagac
gtgttccatgatggggattctgattctggttctggttctggttctggttctgattctgat
tctcacactgatactgatactgaagtctcaaaatttttctttggacctgttaaaagttca
aggtcatcagataatcttaagtttcatgggaatcactcggagacttccaatcatttcata
tccgagtcttgtggtgcccaatgggatgtctttcgtaaacaggatgttcccaagcttgta
gaataccttagaaggcactctaatgagttcactcacacatacggcttccaaaagcatatg
attcatccaatacttgatcagaatttctttcttgatgcatatcataaaatgagactgaag
gaggagttcaaaattgaaccctggagttttgatcaacatattggagaagcagtgattgtt
cctgctggatgcccataccaaattagaaatcttaagtcatgcgtcagcgtggttctggac
ttcctctcgccagaaaatgttactgaatgtattcagttgatggatgaattacgacaactt
ccagagaaccataaggccaaagttgacagtttagaggtgaagaaaatggcattgcacagt
atcaatagagcagtcagaaaaattcatgagcttacacgggcagagaccagcatggacctc
aatggctaa

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